Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDHGA11Q9Y5H2 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.26■□□□□ 0.51
PCDHGA11Q9Y5H2 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA11Q9Y5H2 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PCDHGA11Q9Y5H2 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.26■□□□□ 0.51
PCDHGA11Q9Y5H2 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.26■□□□□ 0.51
PCDHGA11Q9Y5H2 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.26■□□□□ 0.51
PCDHGA11Q9Y5H2 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDHGA11Q9Y5H2 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
PCDHGA11Q9Y5H2 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDHGA11Q9Y5H2 AC083906.6-201ENST00000641366 219 ntBASIC18.26■□□□□ 0.51
PCDHGA11Q9Y5H2 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHGA11Q9Y5H2 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDHGA11Q9Y5H2 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
PCDHGA11Q9Y5H2 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA11Q9Y5H2 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA11Q9Y5H2 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA11Q9Y5H2 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA11Q9Y5H2 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA11Q9Y5H2 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
PCDHGA11Q9Y5H2 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA11Q9Y5H2 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHGA11Q9Y5H2 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
PCDHGA11Q9Y5H2 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA11Q9Y5H2 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA11Q9Y5H2 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PCDHGA11Q9Y5H2 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA11Q9Y5H2 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA11Q9Y5H2 Z98044.1-201ENST00000632503 1764 ntBASIC18.25■□□□□ 0.51
PCDHGA11Q9Y5H2 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA11Q9Y5H2 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA11Q9Y5H2 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA11Q9Y5H2 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA11Q9Y5H2 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA11Q9Y5H2 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA11Q9Y5H2 GCSHP5-201ENST00000443090 522 ntBASIC18.25■□□□□ 0.51
PCDHGA11Q9Y5H2 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA11Q9Y5H2 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PCDHGA11Q9Y5H2 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA11Q9Y5H2 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.25■□□□□ 0.51
PCDHGA11Q9Y5H2 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.25■□□□□ 0.51
PCDHGA11Q9Y5H2 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHGA11Q9Y5H2 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHGA11Q9Y5H2 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA11Q9Y5H2 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PCDHGA11Q9Y5H2 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA11Q9Y5H2 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA11Q9Y5H2 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
PCDHGA11Q9Y5H2 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA11Q9Y5H2 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA11Q9Y5H2 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA11Q9Y5H2 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA11Q9Y5H2 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA11Q9Y5H2 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.25■□□□□ 0.51
PCDHGA11Q9Y5H2 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA11Q9Y5H2 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA11Q9Y5H2 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA11Q9Y5H2 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
PCDHGA11Q9Y5H2 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
PCDHGA11Q9Y5H2 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
PCDHGA11Q9Y5H2 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA11Q9Y5H2 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA11Q9Y5H2 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PCDHGA11Q9Y5H2 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
PCDHGA11Q9Y5H2 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA11Q9Y5H2 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA11Q9Y5H2 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHGA11Q9Y5H2 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
PCDHGA11Q9Y5H2 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PCDHGA11Q9Y5H2 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA11Q9Y5H2 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHGA11Q9Y5H2 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.24■□□□□ 0.51
PCDHGA11Q9Y5H2 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.24■□□□□ 0.51
PCDHGA11Q9Y5H2 AL158047.1-201ENST00000445918 881 ntBASIC18.24■□□□□ 0.51
PCDHGA11Q9Y5H2 AC098590.1-201ENST00000468126 897 ntBASIC18.24■□□□□ 0.51
PCDHGA11Q9Y5H2 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA11Q9Y5H2 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.24■□□□□ 0.51
PCDHGA11Q9Y5H2 AC011298.2-201ENST00000617989 482 ntBASIC18.24■□□□□ 0.51
PCDHGA11Q9Y5H2 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.24■□□□□ 0.51
PCDHGA11Q9Y5H2 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA11Q9Y5H2 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA11Q9Y5H2 AL031598.1-201ENST00000561511 1773 ntBASIC18.24■□□□□ 0.51
PCDHGA11Q9Y5H2 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA11Q9Y5H2 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA11Q9Y5H2 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PCDHGA11Q9Y5H2 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA11Q9Y5H2 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA11Q9Y5H2 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
PCDHGA11Q9Y5H2 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA11Q9Y5H2 AC135050.7-201ENST00000624508 2218 ntBASIC18.23■□□□□ 0.51
PCDHGA11Q9Y5H2 AL390961.4-201ENST00000623958 2535 ntBASIC18.23■□□□□ 0.51
PCDHGA11Q9Y5H2 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA11Q9Y5H2 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA11Q9Y5H2 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA11Q9Y5H2 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
PCDHGA11Q9Y5H2 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA11Q9Y5H2 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDHGA11Q9Y5H2 FSCN1P1-201ENST00000568912 1481 ntBASIC18.23■□□□□ 0.51
PCDHGA11Q9Y5H2 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDHGA11Q9Y5H2 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms