Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
PCDHGB1Q9Y5G3 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PCDHGB1Q9Y5G3 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDHGB1Q9Y5G3 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGB1Q9Y5G3 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGB1Q9Y5G3 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGB1Q9Y5G3 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PCDHGB1Q9Y5G3 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGB1Q9Y5G3 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
PCDHGB1Q9Y5G3 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGB1Q9Y5G3 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
PCDHGB1Q9Y5G3 AC141586.5-201ENST00000624546 2050 ntBASIC17.24■□□□□ 0.35
PCDHGB1Q9Y5G3 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.24■□□□□ 0.35
PCDHGB1Q9Y5G3 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDHGB1Q9Y5G3 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDHGB1Q9Y5G3 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.23■□□□□ 0.35
PCDHGB1Q9Y5G3 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
PCDHGB1Q9Y5G3 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
PCDHGB1Q9Y5G3 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGB1Q9Y5G3 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGB1Q9Y5G3 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGB1Q9Y5G3 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGB1Q9Y5G3 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGB1Q9Y5G3 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGB1Q9Y5G3 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGB1Q9Y5G3 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.23■□□□□ 0.35
PCDHGB1Q9Y5G3 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGB1Q9Y5G3 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDHGB1Q9Y5G3 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGB1Q9Y5G3 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.23■□□□□ 0.35
PCDHGB1Q9Y5G3 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGB1Q9Y5G3 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGB1Q9Y5G3 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGB1Q9Y5G3 AL512625.2-201ENST00000417533 625 ntBASIC17.23■□□□□ 0.35
PCDHGB1Q9Y5G3 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGB1Q9Y5G3 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
PCDHGB1Q9Y5G3 AC231657.2-201ENST00000624556 255 ntBASIC17.23■□□□□ 0.35
PCDHGB1Q9Y5G3 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
PCDHGB1Q9Y5G3 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGB1Q9Y5G3 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDHGB1Q9Y5G3 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGB1Q9Y5G3 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.23■□□□□ 0.35
PCDHGB1Q9Y5G3 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PCDHGB1Q9Y5G3 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDHGB1Q9Y5G3 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGB1Q9Y5G3 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.23■□□□□ 0.35
PCDHGB1Q9Y5G3 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGB1Q9Y5G3 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGB1Q9Y5G3 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDHGB1Q9Y5G3 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
PCDHGB1Q9Y5G3 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.23■□□□□ 0.35
PCDHGB1Q9Y5G3 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB1Q9Y5G3 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB1Q9Y5G3 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHGB1Q9Y5G3 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB1Q9Y5G3 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB1Q9Y5G3 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB1Q9Y5G3 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB1Q9Y5G3 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB1Q9Y5G3 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
PCDHGB1Q9Y5G3 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB1Q9Y5G3 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
PCDHGB1Q9Y5G3 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB1Q9Y5G3 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB1Q9Y5G3 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB1Q9Y5G3 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB1Q9Y5G3 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PCDHGB1Q9Y5G3 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHGB1Q9Y5G3 KRT18P6-201ENST00000555540 1265 ntBASIC17.22■□□□□ 0.35
PCDHGB1Q9Y5G3 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.22■□□□□ 0.35
PCDHGB1Q9Y5G3 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.22■□□□□ 0.35
PCDHGB1Q9Y5G3 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB1Q9Y5G3 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHGB1Q9Y5G3 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHGB1Q9Y5G3 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.22■□□□□ 0.35
PCDHGB1Q9Y5G3 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.22■□□□□ 0.35
PCDHGB1Q9Y5G3 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB1Q9Y5G3 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB1Q9Y5G3 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB1Q9Y5G3 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PCDHGB1Q9Y5G3 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.22■□□□□ 0.35
PCDHGB1Q9Y5G3 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PCDHGB1Q9Y5G3 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.22■□□□□ 0.35
PCDHGB1Q9Y5G3 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
PCDHGB1Q9Y5G3 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
PCDHGB1Q9Y5G3 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB1Q9Y5G3 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHGB1Q9Y5G3 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB1Q9Y5G3 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.22■□□□□ 0.35
PCDHGB1Q9Y5G3 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PCDHGB1Q9Y5G3 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGB1Q9Y5G3 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGB1Q9Y5G3 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
PCDHGB1Q9Y5G3 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGB1Q9Y5G3 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGB1Q9Y5G3 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGB1Q9Y5G3 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGB1Q9Y5G3 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
PCDHGB1Q9Y5G3 AC012313.1-201ENST00000593393 3059 ntBASIC17.21■□□□□ 0.35
PCDHGB1Q9Y5G3 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms