Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC23.72■■□□□ 1.39
RTCBQ9Y3I0 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC23.72■■□□□ 1.39
RTCBQ9Y3I0 AC064862.7-201ENST00000604520 867 ntBASIC23.72■■□□□ 1.39
RTCBQ9Y3I0 CCNC-219ENST00000627680 896 ntTSL 5 BASIC23.72■■□□□ 1.39
RTCBQ9Y3I0 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
RTCBQ9Y3I0 NSUN5P1-202ENST00000421140 1535 ntBASIC23.72■■□□□ 1.39
RTCBQ9Y3I0 NSUN5P2-203ENST00000457352 1529 ntBASIC23.72■■□□□ 1.39
RTCBQ9Y3I0 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC23.72■■□□□ 1.39
RTCBQ9Y3I0 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RTCBQ9Y3I0 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RTCBQ9Y3I0 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC23.72■■□□□ 1.39
RTCBQ9Y3I0 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RTCBQ9Y3I0 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RTCBQ9Y3I0 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
RTCBQ9Y3I0 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RTCBQ9Y3I0 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RTCBQ9Y3I0 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RTCBQ9Y3I0 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
RTCBQ9Y3I0 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC23.71■■□□□ 1.39
RTCBQ9Y3I0 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RTCBQ9Y3I0 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RTCBQ9Y3I0 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC23.71■■□□□ 1.39
RTCBQ9Y3I0 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC23.71■■□□□ 1.39
RTCBQ9Y3I0 VENTXP7-201ENST00000475503 772 ntBASIC23.71■■□□□ 1.39
RTCBQ9Y3I0 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RTCBQ9Y3I0 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC23.71■■□□□ 1.39
RTCBQ9Y3I0 MIR3180-4-201ENST00000582223 153 ntBASIC23.71■■□□□ 1.39
RTCBQ9Y3I0 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC23.71■■□□□ 1.39
RTCBQ9Y3I0 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
RTCBQ9Y3I0 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RTCBQ9Y3I0 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RTCBQ9Y3I0 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC23.71■■□□□ 1.39
RTCBQ9Y3I0 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RTCBQ9Y3I0 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RTCBQ9Y3I0 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RTCBQ9Y3I0 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
RTCBQ9Y3I0 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC23.7■■□□□ 1.39
RTCBQ9Y3I0 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.39
RTCBQ9Y3I0 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
RTCBQ9Y3I0 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC23.7■■□□□ 1.38
RTCBQ9Y3I0 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC23.7■■□□□ 1.38
RTCBQ9Y3I0 LSM5-204ENST00000409909 740 ntTSL 2 BASIC23.7■■□□□ 1.38
RTCBQ9Y3I0 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC23.7■■□□□ 1.38
RTCBQ9Y3I0 NUS1P2-201ENST00000417358 873 ntBASIC23.7■■□□□ 1.38
RTCBQ9Y3I0 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC23.7■■□□□ 1.38
RTCBQ9Y3I0 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC23.7■■□□□ 1.38
RTCBQ9Y3I0 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC23.7■■□□□ 1.38
RTCBQ9Y3I0 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC23.7■■□□□ 1.38
RTCBQ9Y3I0 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC23.7■■□□□ 1.38
RTCBQ9Y3I0 TEN1-204ENST00000588202 862 ntTSL 3 BASIC23.7■■□□□ 1.38
RTCBQ9Y3I0 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
RTCBQ9Y3I0 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
RTCBQ9Y3I0 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
RTCBQ9Y3I0 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
RTCBQ9Y3I0 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC23.69■■□□□ 1.38
RTCBQ9Y3I0 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC23.69■■□□□ 1.38
RTCBQ9Y3I0 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RTCBQ9Y3I0 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RTCBQ9Y3I0 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RTCBQ9Y3I0 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RTCBQ9Y3I0 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RTCBQ9Y3I0 MIR574-201ENST00000385209 96 ntBASIC23.69■■□□□ 1.38
RTCBQ9Y3I0 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
RTCBQ9Y3I0 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
RTCBQ9Y3I0 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC23.69■■□□□ 1.38
RTCBQ9Y3I0 RNA5SP419-201ENST00000515908 135 ntBASIC23.69■■□□□ 1.38
RTCBQ9Y3I0 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
RTCBQ9Y3I0 AP001005.1-201ENST00000571755 1248 ntBASIC23.69■■□□□ 1.38
RTCBQ9Y3I0 AP005901.3-202ENST00000581653 237 ntBASIC23.69■■□□□ 1.38
RTCBQ9Y3I0 AC024563.2-201ENST00000603282 481 ntBASIC23.69■■□□□ 1.38
RTCBQ9Y3I0 TP73-AS1-207ENST00000624167 988 ntBASIC23.69■■□□□ 1.38
RTCBQ9Y3I0 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC23.69■■□□□ 1.38
RTCBQ9Y3I0 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
RTCBQ9Y3I0 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC23.69■■□□□ 1.38
RTCBQ9Y3I0 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC23.69■■□□□ 1.38
RTCBQ9Y3I0 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RTCBQ9Y3I0 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RTCBQ9Y3I0 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC23.68■■□□□ 1.38
RTCBQ9Y3I0 AC092667.1-201ENST00000434301 2586 ntBASIC23.68■■□□□ 1.38
RTCBQ9Y3I0 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RTCBQ9Y3I0 IL9RP2-201ENST00000423948 1312 ntBASIC23.68■■□□□ 1.38
RTCBQ9Y3I0 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
RTCBQ9Y3I0 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RTCBQ9Y3I0 RPP21-221ENST00000428040 594 ntTSL 2 BASIC23.68■■□□□ 1.38
RTCBQ9Y3I0 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC23.68■■□□□ 1.38
RTCBQ9Y3I0 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RTCBQ9Y3I0 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC23.68■■□□□ 1.38
RTCBQ9Y3I0 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
RTCBQ9Y3I0 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC23.68■■□□□ 1.38
RTCBQ9Y3I0 IGHV3OR16-7-201ENST00000604106 360 ntBASIC23.68■■□□□ 1.38
RTCBQ9Y3I0 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC23.68■■□□□ 1.38
RTCBQ9Y3I0 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
RTCBQ9Y3I0 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RTCBQ9Y3I0 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
RTCBQ9Y3I0 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RTCBQ9Y3I0 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC23.68■■□□□ 1.38
RTCBQ9Y3I0 Z82202.1-201ENST00000623446 1880 ntBASIC23.68■■□□□ 1.38
RTCBQ9Y3I0 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
RTCBQ9Y3I0 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
RTCBQ9Y3I0 LBX2-AS1-202ENST00000603175 2083 ntBASIC23.68■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms