Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
EBF1Q9UH73 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
EBF1Q9UH73 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
EBF1Q9UH73 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.15■□□□□ 0.66
EBF1Q9UH73 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
EBF1Q9UH73 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
EBF1Q9UH73 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
EBF1Q9UH73 AC104417.2-201ENST00000562989 1793 ntBASIC19.15■□□□□ 0.66
EBF1Q9UH73 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
EBF1Q9UH73 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
EBF1Q9UH73 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.15■□□□□ 0.66
EBF1Q9UH73 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
EBF1Q9UH73 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.15■□□□□ 0.66
EBF1Q9UH73 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.15■□□□□ 0.66
EBF1Q9UH73 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
EBF1Q9UH73 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
EBF1Q9UH73 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
EBF1Q9UH73 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
EBF1Q9UH73 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
EBF1Q9UH73 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.15■□□□□ 0.66
EBF1Q9UH73 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
EBF1Q9UH73 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
EBF1Q9UH73 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
EBF1Q9UH73 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
EBF1Q9UH73 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
EBF1Q9UH73 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
EBF1Q9UH73 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
EBF1Q9UH73 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
EBF1Q9UH73 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
EBF1Q9UH73 AC116562.4-201ENST00000641316 2276 ntBASIC19.14■□□□□ 0.66
EBF1Q9UH73 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
EBF1Q9UH73 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
EBF1Q9UH73 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.14■□□□□ 0.66
EBF1Q9UH73 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
EBF1Q9UH73 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.14■□□□□ 0.66
EBF1Q9UH73 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
EBF1Q9UH73 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
EBF1Q9UH73 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
EBF1Q9UH73 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
EBF1Q9UH73 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.14■□□□□ 0.65
EBF1Q9UH73 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
EBF1Q9UH73 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
EBF1Q9UH73 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
EBF1Q9UH73 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
EBF1Q9UH73 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.14■□□□□ 0.65
EBF1Q9UH73 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
EBF1Q9UH73 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.14■□□□□ 0.65
EBF1Q9UH73 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
EBF1Q9UH73 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
EBF1Q9UH73 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
EBF1Q9UH73 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.14■□□□□ 0.65
EBF1Q9UH73 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.14■□□□□ 0.65
EBF1Q9UH73 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
EBF1Q9UH73 CR769767.2-201ENST00000622735 460 ntBASIC19.14■□□□□ 0.65
EBF1Q9UH73 AC012313.10-201ENST00000623509 926 ntBASIC19.14■□□□□ 0.65
EBF1Q9UH73 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
EBF1Q9UH73 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
EBF1Q9UH73 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
EBF1Q9UH73 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
EBF1Q9UH73 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
EBF1Q9UH73 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
EBF1Q9UH73 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
EBF1Q9UH73 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
EBF1Q9UH73 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.13■□□□□ 0.65
EBF1Q9UH73 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
EBF1Q9UH73 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
EBF1Q9UH73 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
EBF1Q9UH73 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
EBF1Q9UH73 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
EBF1Q9UH73 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.13■□□□□ 0.65
EBF1Q9UH73 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
EBF1Q9UH73 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
EBF1Q9UH73 AC034232.1-201ENST00000506026 1064 ntBASIC19.13■□□□□ 0.65
EBF1Q9UH73 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.13■□□□□ 0.65
EBF1Q9UH73 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
EBF1Q9UH73 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
EBF1Q9UH73 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
EBF1Q9UH73 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
EBF1Q9UH73 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
EBF1Q9UH73 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
EBF1Q9UH73 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
EBF1Q9UH73 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
EBF1Q9UH73 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.13■□□□□ 0.65
EBF1Q9UH73 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
EBF1Q9UH73 AC099778.1-201ENST00000568593 1911 ntBASIC19.13■□□□□ 0.65
EBF1Q9UH73 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
EBF1Q9UH73 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
EBF1Q9UH73 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
EBF1Q9UH73 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
EBF1Q9UH73 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
EBF1Q9UH73 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
EBF1Q9UH73 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.12■□□□□ 0.65
EBF1Q9UH73 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.12■□□□□ 0.65
EBF1Q9UH73 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.12■□□□□ 0.65
EBF1Q9UH73 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
EBF1Q9UH73 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
EBF1Q9UH73 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
EBF1Q9UH73 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
EBF1Q9UH73 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
EBF1Q9UH73 AL645929.1-201ENST00000420084 975 ntBASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms