Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LINC00474Q9P2X8 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LINC00474Q9P2X8 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC12.27□□□□□ -0.44
LINC00474Q9P2X8 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LINC00474Q9P2X8 POLI-202ENST00000406285 2030 ntTSL 2 BASIC12.27□□□□□ -0.44
LINC00474Q9P2X8 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC12.27□□□□□ -0.44
LINC00474Q9P2X8 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00474Q9P2X8 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00474Q9P2X8 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00474Q9P2X8 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
LINC00474Q9P2X8 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00474Q9P2X8 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00474Q9P2X8 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00474Q9P2X8 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00474Q9P2X8 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00474Q9P2X8 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00474Q9P2X8 DERL1-203ENST00000419562 918 ntTSL 2 BASIC12.27□□□□□ -0.45
LINC00474Q9P2X8 SAPCD2P4-201ENST00000424595 1171 ntBASIC12.27□□□□□ -0.45
LINC00474Q9P2X8 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC12.27□□□□□ -0.45
LINC00474Q9P2X8 RPS2P4-201ENST00000476944 856 ntBASIC12.27□□□□□ -0.45
LINC00474Q9P2X8 TK2-204ENST00000525974 1178 ntTSL 2 BASIC12.27□□□□□ -0.45
LINC00474Q9P2X8 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC12.27□□□□□ -0.45
LINC00474Q9P2X8 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC12.27□□□□□ -0.45
LINC00474Q9P2X8 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC12.27□□□□□ -0.45
LINC00474Q9P2X8 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC12.27□□□□□ -0.45
LINC00474Q9P2X8 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC12.27□□□□□ -0.45
LINC00474Q9P2X8 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC12.27□□□□□ -0.45
LINC00474Q9P2X8 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC12.27□□□□□ -0.45
LINC00474Q9P2X8 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC12.27□□□□□ -0.45
LINC00474Q9P2X8 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00474Q9P2X8 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00474Q9P2X8 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC12.27□□□□□ -0.45
LINC00474Q9P2X8 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC12.27□□□□□ -0.45
LINC00474Q9P2X8 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00474Q9P2X8 AC125437.2-201ENST00000625180 2167 ntBASIC12.27□□□□□ -0.45
LINC00474Q9P2X8 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
LINC00474Q9P2X8 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00474Q9P2X8 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00474Q9P2X8 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC12.27□□□□□ -0.45
LINC00474Q9P2X8 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00474Q9P2X8 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
LINC00474Q9P2X8 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.45
LINC00474Q9P2X8 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00474Q9P2X8 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00474Q9P2X8 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC12.27□□□□□ -0.45
LINC00474Q9P2X8 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
LINC00474Q9P2X8 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00474Q9P2X8 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00474Q9P2X8 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00474Q9P2X8 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00474Q9P2X8 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00474Q9P2X8 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00474Q9P2X8 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
LINC00474Q9P2X8 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00474Q9P2X8 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
LINC00474Q9P2X8 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00474Q9P2X8 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00474Q9P2X8 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00474Q9P2X8 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC12.26□□□□□ -0.45
LINC00474Q9P2X8 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC12.26□□□□□ -0.45
LINC00474Q9P2X8 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00474Q9P2X8 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00474Q9P2X8 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC12.26□□□□□ -0.45
LINC00474Q9P2X8 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC12.26□□□□□ -0.45
LINC00474Q9P2X8 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00474Q9P2X8 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00474Q9P2X8 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00474Q9P2X8 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC12.26□□□□□ -0.45
LINC00474Q9P2X8 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00474Q9P2X8 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00474Q9P2X8 MDFI-202ENST00000373050 809 ntTSL 2 BASIC12.26□□□□□ -0.45
LINC00474Q9P2X8 AC004980.1-204ENST00000429707 299 ntBASIC12.26□□□□□ -0.45
LINC00474Q9P2X8 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
LINC00474Q9P2X8 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC12.26□□□□□ -0.45
LINC00474Q9P2X8 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00474Q9P2X8 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00474Q9P2X8 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00474Q9P2X8 DHDH-203ENST00000522614 776 ntTSL 5 BASIC12.26□□□□□ -0.45
LINC00474Q9P2X8 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
LINC00474Q9P2X8 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC12.26□□□□□ -0.45
LINC00474Q9P2X8 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC12.26□□□□□ -0.45
LINC00474Q9P2X8 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC12.26□□□□□ -0.45
LINC00474Q9P2X8 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00474Q9P2X8 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00474Q9P2X8 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00474Q9P2X8 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00474Q9P2X8 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00474Q9P2X8 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
LINC00474Q9P2X8 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00474Q9P2X8 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00474Q9P2X8 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00474Q9P2X8 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00474Q9P2X8 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
LINC00474Q9P2X8 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
LINC00474Q9P2X8 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
LINC00474Q9P2X8 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC12.26□□□□□ -0.45
LINC00474Q9P2X8 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00474Q9P2X8 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC12.26□□□□□ -0.45
LINC00474Q9P2X8 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC12.26□□□□□ -0.45
LINC00474Q9P2X8 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms