Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.12■□□□□ 0.49
SPHK1Q9NYA1 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.12■□□□□ 0.49
SPHK1Q9NYA1 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.12■□□□□ 0.49
SPHK1Q9NYA1 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SPHK1Q9NYA1 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SPHK1Q9NYA1 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.12■□□□□ 0.49
SPHK1Q9NYA1 BX664615.1-201ENST00000443558 458 ntBASIC18.12■□□□□ 0.49
SPHK1Q9NYA1 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SPHK1Q9NYA1 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.12■□□□□ 0.49
SPHK1Q9NYA1 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.12■□□□□ 0.49
SPHK1Q9NYA1 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.12■□□□□ 0.49
SPHK1Q9NYA1 AL512604.3-201ENST00000569583 964 ntBASIC18.12■□□□□ 0.49
SPHK1Q9NYA1 AC139887.4-201ENST00000607877 719 ntBASIC18.12■□□□□ 0.49
SPHK1Q9NYA1 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
SPHK1Q9NYA1 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
SPHK1Q9NYA1 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SPHK1Q9NYA1 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
SPHK1Q9NYA1 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SPHK1Q9NYA1 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SPHK1Q9NYA1 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SPHK1Q9NYA1 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SPHK1Q9NYA1 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.12■□□□□ 0.49
SPHK1Q9NYA1 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPHK1Q9NYA1 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.11■□□□□ 0.49
SPHK1Q9NYA1 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPHK1Q9NYA1 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SPHK1Q9NYA1 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.11■□□□□ 0.49
SPHK1Q9NYA1 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPHK1Q9NYA1 AC117947.1-201ENST00000427448 529 ntBASIC18.11■□□□□ 0.49
SPHK1Q9NYA1 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
SPHK1Q9NYA1 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.11■□□□□ 0.49
SPHK1Q9NYA1 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SPHK1Q9NYA1 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.11■□□□□ 0.49
SPHK1Q9NYA1 WWOX-216ENST00000569818 525 ntBASIC18.11■□□□□ 0.49
SPHK1Q9NYA1 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.11■□□□□ 0.49
SPHK1Q9NYA1 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SPHK1Q9NYA1 MIR3180-5-201ENST00000583743 153 ntBASIC18.11■□□□□ 0.49
SPHK1Q9NYA1 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPHK1Q9NYA1 AC068587.9-201ENST00000641814 219 ntBASIC18.11■□□□□ 0.49
SPHK1Q9NYA1 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPHK1Q9NYA1 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPHK1Q9NYA1 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPHK1Q9NYA1 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.11■□□□□ 0.49
SPHK1Q9NYA1 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPHK1Q9NYA1 AL109659.2-201ENST00000606809 1674 ntBASIC18.11■□□□□ 0.49
SPHK1Q9NYA1 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPHK1Q9NYA1 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SPHK1Q9NYA1 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SPHK1Q9NYA1 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SPHK1Q9NYA1 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPHK1Q9NYA1 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SPHK1Q9NYA1 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.1■□□□□ 0.49
SPHK1Q9NYA1 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SPHK1Q9NYA1 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SPHK1Q9NYA1 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SPHK1Q9NYA1 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SPHK1Q9NYA1 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SPHK1Q9NYA1 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SPHK1Q9NYA1 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SPHK1Q9NYA1 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.1■□□□□ 0.49
SPHK1Q9NYA1 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SPHK1Q9NYA1 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SPHK1Q9NYA1 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.1■□□□□ 0.49
SPHK1Q9NYA1 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.1■□□□□ 0.49
SPHK1Q9NYA1 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SPHK1Q9NYA1 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.1■□□□□ 0.49
SPHK1Q9NYA1 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SPHK1Q9NYA1 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
SPHK1Q9NYA1 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.1■□□□□ 0.49
SPHK1Q9NYA1 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.1■□□□□ 0.49
SPHK1Q9NYA1 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.1■□□□□ 0.49
SPHK1Q9NYA1 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.1■□□□□ 0.49
SPHK1Q9NYA1 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.1■□□□□ 0.49
SPHK1Q9NYA1 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.1■□□□□ 0.49
SPHK1Q9NYA1 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.1■□□□□ 0.49
SPHK1Q9NYA1 AL023973.1-201ENST00000624619 620 ntBASIC18.1■□□□□ 0.49
SPHK1Q9NYA1 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SPHK1Q9NYA1 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SPHK1Q9NYA1 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SPHK1Q9NYA1 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SPHK1Q9NYA1 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SPHK1Q9NYA1 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SPHK1Q9NYA1 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SPHK1Q9NYA1 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SPHK1Q9NYA1 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SPHK1Q9NYA1 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.09■□□□□ 0.49
SPHK1Q9NYA1 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
SPHK1Q9NYA1 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SPHK1Q9NYA1 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SPHK1Q9NYA1 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SPHK1Q9NYA1 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SPHK1Q9NYA1 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.09■□□□□ 0.49
SPHK1Q9NYA1 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SPHK1Q9NYA1 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SPHK1Q9NYA1 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
SPHK1Q9NYA1 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SPHK1Q9NYA1 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SPHK1Q9NYA1 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SPHK1Q9NYA1 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
SPHK1Q9NYA1 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms