Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC24.13■■□□□ 1.45
SMC4Q9NTJ3 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC24.13■■□□□ 1.45
SMC4Q9NTJ3 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC24.13■■□□□ 1.45
SMC4Q9NTJ3 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SMC4Q9NTJ3 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC24.13■■□□□ 1.45
SMC4Q9NTJ3 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
SMC4Q9NTJ3 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
SMC4Q9NTJ3 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC24.13■■□□□ 1.45
SMC4Q9NTJ3 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC24.13■■□□□ 1.45
SMC4Q9NTJ3 AL023803.3-201ENST00000615559 522 ntBASIC24.13■■□□□ 1.45
SMC4Q9NTJ3 GPAT2P1-201ENST00000444924 1672 ntBASIC24.13■■□□□ 1.45
SMC4Q9NTJ3 NFYC-AS1-201ENST00000606277 1687 ntBASIC24.13■■□□□ 1.45
SMC4Q9NTJ3 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SMC4Q9NTJ3 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
SMC4Q9NTJ3 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
SMC4Q9NTJ3 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
SMC4Q9NTJ3 Z98044.1-201ENST00000632503 1764 ntBASIC24.13■■□□□ 1.45
SMC4Q9NTJ3 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
SMC4Q9NTJ3 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC24.13■■□□□ 1.45
SMC4Q9NTJ3 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SMC4Q9NTJ3 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC24.12■■□□□ 1.45
SMC4Q9NTJ3 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
SMC4Q9NTJ3 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SMC4Q9NTJ3 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC24.12■■□□□ 1.45
SMC4Q9NTJ3 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
SMC4Q9NTJ3 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC24.12■■□□□ 1.45
SMC4Q9NTJ3 COBL-210ENST00000632460 1941 ntTSL 5 BASIC24.12■■□□□ 1.45
SMC4Q9NTJ3 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC24.12■■□□□ 1.45
SMC4Q9NTJ3 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC24.12■■□□□ 1.45
SMC4Q9NTJ3 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
SMC4Q9NTJ3 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC24.12■■□□□ 1.45
SMC4Q9NTJ3 MMP23A-201ENST00000234610 1017 ntBASIC24.12■■□□□ 1.45
SMC4Q9NTJ3 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC24.12■■□□□ 1.45
SMC4Q9NTJ3 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SMC4Q9NTJ3 BX088651.1-201ENST00000540551 451 ntBASIC24.12■■□□□ 1.45
SMC4Q9NTJ3 MIR4674-201ENST00000582457 87 ntBASIC24.12■■□□□ 1.45
SMC4Q9NTJ3 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC24.12■■□□□ 1.45
SMC4Q9NTJ3 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC24.12■■□□□ 1.45
SMC4Q9NTJ3 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC24.12■■□□□ 1.45
SMC4Q9NTJ3 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
SMC4Q9NTJ3 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
SMC4Q9NTJ3 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SMC4Q9NTJ3 ANO7L1-203ENST00000602586 1720 ntBASIC24.12■■□□□ 1.45
SMC4Q9NTJ3 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SMC4Q9NTJ3 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC24.12■■□□□ 1.45
SMC4Q9NTJ3 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC24.12■■□□□ 1.45
SMC4Q9NTJ3 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC24.12■■□□□ 1.45
SMC4Q9NTJ3 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
SMC4Q9NTJ3 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC24.11■■□□□ 1.45
SMC4Q9NTJ3 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC24.11■■□□□ 1.45
SMC4Q9NTJ3 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC24.11■■□□□ 1.45
SMC4Q9NTJ3 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC24.11■■□□□ 1.45
SMC4Q9NTJ3 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC24.11■■□□□ 1.45
SMC4Q9NTJ3 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
SMC4Q9NTJ3 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
SMC4Q9NTJ3 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
SMC4Q9NTJ3 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
SMC4Q9NTJ3 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC24.11■■□□□ 1.45
SMC4Q9NTJ3 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC24.11■■□□□ 1.45
SMC4Q9NTJ3 AL023284.2-201ENST00000405850 579 ntBASIC24.11■■□□□ 1.45
SMC4Q9NTJ3 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC24.11■■□□□ 1.45
SMC4Q9NTJ3 SLC25A1P2-201ENST00000430693 912 ntBASIC24.11■■□□□ 1.45
SMC4Q9NTJ3 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC24.11■■□□□ 1.45
SMC4Q9NTJ3 C2orf69P3-201ENST00000565542 1120 ntBASIC24.11■■□□□ 1.45
SMC4Q9NTJ3 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SMC4Q9NTJ3 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC24.11■■□□□ 1.45
SMC4Q9NTJ3 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
SMC4Q9NTJ3 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
SMC4Q9NTJ3 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SMC4Q9NTJ3 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SMC4Q9NTJ3 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
SMC4Q9NTJ3 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SMC4Q9NTJ3 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC24.1■■□□□ 1.45
SMC4Q9NTJ3 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SMC4Q9NTJ3 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SMC4Q9NTJ3 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC24.1■■□□□ 1.45
SMC4Q9NTJ3 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC24.1■■□□□ 1.45
SMC4Q9NTJ3 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC24.1■■□□□ 1.45
SMC4Q9NTJ3 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC24.1■■□□□ 1.45
SMC4Q9NTJ3 AC010947.1-201ENST00000623454 693 ntBASIC24.1■■□□□ 1.45
SMC4Q9NTJ3 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC24.1■■□□□ 1.45
SMC4Q9NTJ3 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
SMC4Q9NTJ3 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC24.1■■□□□ 1.45
SMC4Q9NTJ3 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SMC4Q9NTJ3 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SMC4Q9NTJ3 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC24.09■■□□□ 1.45
SMC4Q9NTJ3 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
SMC4Q9NTJ3 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
SMC4Q9NTJ3 INGX-201ENST00000359239 846 ntBASIC24.09■■□□□ 1.45
SMC4Q9NTJ3 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC24.09■■□□□ 1.45
SMC4Q9NTJ3 AC008556.1-201ENST00000610908 2040 ntBASIC24.09■■□□□ 1.45
SMC4Q9NTJ3 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
SMC4Q9NTJ3 AL138781.2-201ENST00000617896 1843 ntBASIC24.09■■□□□ 1.45
SMC4Q9NTJ3 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC24.09■■□□□ 1.45
SMC4Q9NTJ3 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
SMC4Q9NTJ3 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
SMC4Q9NTJ3 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
SMC4Q9NTJ3 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
SMC4Q9NTJ3 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC24.09■■□□□ 1.45
SMC4Q9NTJ3 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms