Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SDHAF3Q9NRP4 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SDHAF3Q9NRP4 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SDHAF3Q9NRP4 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SDHAF3Q9NRP4 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.28■□□□□ 0.36
SDHAF3Q9NRP4 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SDHAF3Q9NRP4 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SDHAF3Q9NRP4 AL161938.1-201ENST00000569833 2180 ntBASIC17.28■□□□□ 0.36
SDHAF3Q9NRP4 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SDHAF3Q9NRP4 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SDHAF3Q9NRP4 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SDHAF3Q9NRP4 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SDHAF3Q9NRP4 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SDHAF3Q9NRP4 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.27■□□□□ 0.36
SDHAF3Q9NRP4 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SDHAF3Q9NRP4 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SDHAF3Q9NRP4 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.27■□□□□ 0.36
SDHAF3Q9NRP4 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
SDHAF3Q9NRP4 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SDHAF3Q9NRP4 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.27■□□□□ 0.36
SDHAF3Q9NRP4 AC010947.1-201ENST00000623454 693 ntBASIC17.27■□□□□ 0.36
SDHAF3Q9NRP4 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SDHAF3Q9NRP4 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
SDHAF3Q9NRP4 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.27■□□□□ 0.35
SDHAF3Q9NRP4 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SDHAF3Q9NRP4 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SDHAF3Q9NRP4 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.27■□□□□ 0.35
SDHAF3Q9NRP4 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SDHAF3Q9NRP4 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SDHAF3Q9NRP4 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.27■□□□□ 0.35
SDHAF3Q9NRP4 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.27■□□□□ 0.35
SDHAF3Q9NRP4 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SDHAF3Q9NRP4 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SDHAF3Q9NRP4 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.26■□□□□ 0.35
SDHAF3Q9NRP4 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SDHAF3Q9NRP4 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.26■□□□□ 0.35
SDHAF3Q9NRP4 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SDHAF3Q9NRP4 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
SDHAF3Q9NRP4 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.26■□□□□ 0.35
SDHAF3Q9NRP4 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SDHAF3Q9NRP4 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.26■□□□□ 0.35
SDHAF3Q9NRP4 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SDHAF3Q9NRP4 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SDHAF3Q9NRP4 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SDHAF3Q9NRP4 CYP2D8P-201ENST00000433633 1490 ntBASIC17.26■□□□□ 0.35
SDHAF3Q9NRP4 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SDHAF3Q9NRP4 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.26■□□□□ 0.35
SDHAF3Q9NRP4 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SDHAF3Q9NRP4 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SDHAF3Q9NRP4 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SDHAF3Q9NRP4 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SDHAF3Q9NRP4 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.26■□□□□ 0.35
SDHAF3Q9NRP4 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SDHAF3Q9NRP4 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.26■□□□□ 0.35
SDHAF3Q9NRP4 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.26■□□□□ 0.35
SDHAF3Q9NRP4 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.26■□□□□ 0.35
SDHAF3Q9NRP4 AL023803.3-201ENST00000615559 522 ntBASIC17.26■□□□□ 0.35
SDHAF3Q9NRP4 AC133561.5-201ENST00000635547 218 ntBASIC17.26■□□□□ 0.35
SDHAF3Q9NRP4 AC026471.1-201ENST00000564629 3026 ntBASIC17.26■□□□□ 0.35
SDHAF3Q9NRP4 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SDHAF3Q9NRP4 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SDHAF3Q9NRP4 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SDHAF3Q9NRP4 KRT8P9-201ENST00000558927 1449 ntBASIC17.26■□□□□ 0.35
SDHAF3Q9NRP4 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SDHAF3Q9NRP4 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SDHAF3Q9NRP4 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SDHAF3Q9NRP4 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SDHAF3Q9NRP4 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.26■□□□□ 0.35
SDHAF3Q9NRP4 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SDHAF3Q9NRP4 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SDHAF3Q9NRP4 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SDHAF3Q9NRP4 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SDHAF3Q9NRP4 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SDHAF3Q9NRP4 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SDHAF3Q9NRP4 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SDHAF3Q9NRP4 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.25■□□□□ 0.35
SDHAF3Q9NRP4 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
SDHAF3Q9NRP4 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.25■□□□□ 0.35
SDHAF3Q9NRP4 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SDHAF3Q9NRP4 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SDHAF3Q9NRP4 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SDHAF3Q9NRP4 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SDHAF3Q9NRP4 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SDHAF3Q9NRP4 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.25■□□□□ 0.35
SDHAF3Q9NRP4 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SDHAF3Q9NRP4 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SDHAF3Q9NRP4 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
SDHAF3Q9NRP4 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SDHAF3Q9NRP4 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.25■□□□□ 0.35
SDHAF3Q9NRP4 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SDHAF3Q9NRP4 AL512604.3-201ENST00000569583 964 ntBASIC17.25■□□□□ 0.35
SDHAF3Q9NRP4 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.25■□□□□ 0.35
SDHAF3Q9NRP4 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SDHAF3Q9NRP4 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SDHAF3Q9NRP4 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SDHAF3Q9NRP4 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
SDHAF3Q9NRP4 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SDHAF3Q9NRP4 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SDHAF3Q9NRP4 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SDHAF3Q9NRP4 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms