Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 AL512353.2-201ENST00000448759 1962 ntBASIC17.78■□□□□ 0.44
PRDM9Q9NQV7 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PRDM9Q9NQV7 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.78■□□□□ 0.44
PRDM9Q9NQV7 AL031598.1-201ENST00000561511 1773 ntBASIC17.78■□□□□ 0.44
PRDM9Q9NQV7 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PRDM9Q9NQV7 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.78■□□□□ 0.44
PRDM9Q9NQV7 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PRDM9Q9NQV7 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
PRDM9Q9NQV7 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PRDM9Q9NQV7 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PRDM9Q9NQV7 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PRDM9Q9NQV7 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
PRDM9Q9NQV7 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.78■□□□□ 0.44
PRDM9Q9NQV7 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.78■□□□□ 0.44
PRDM9Q9NQV7 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PRDM9Q9NQV7 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
PRDM9Q9NQV7 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PRDM9Q9NQV7 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PRDM9Q9NQV7 HEIH-201ENST00000623091 1652 ntBASIC17.77■□□□□ 0.44
PRDM9Q9NQV7 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.77■□□□□ 0.44
PRDM9Q9NQV7 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PRDM9Q9NQV7 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
PRDM9Q9NQV7 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PRDM9Q9NQV7 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.77■□□□□ 0.44
PRDM9Q9NQV7 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PRDM9Q9NQV7 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PRDM9Q9NQV7 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PRDM9Q9NQV7 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PRDM9Q9NQV7 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.77■□□□□ 0.44
PRDM9Q9NQV7 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.77■□□□□ 0.44
PRDM9Q9NQV7 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.77■□□□□ 0.44
PRDM9Q9NQV7 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.77■□□□□ 0.44
PRDM9Q9NQV7 FAM87A-204ENST00000613235 858 ntBASIC17.77■□□□□ 0.44
PRDM9Q9NQV7 AC087289.5-201ENST00000586076 3175 ntBASIC17.77■□□□□ 0.44
PRDM9Q9NQV7 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PRDM9Q9NQV7 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.77■□□□□ 0.44
PRDM9Q9NQV7 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
PRDM9Q9NQV7 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PRDM9Q9NQV7 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
PRDM9Q9NQV7 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PRDM9Q9NQV7 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
PRDM9Q9NQV7 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
PRDM9Q9NQV7 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.77■□□□□ 0.43
PRDM9Q9NQV7 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PRDM9Q9NQV7 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.76■□□□□ 0.43
PRDM9Q9NQV7 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PRDM9Q9NQV7 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
PRDM9Q9NQV7 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.76■□□□□ 0.43
PRDM9Q9NQV7 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PRDM9Q9NQV7 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
PRDM9Q9NQV7 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.76■□□□□ 0.43
PRDM9Q9NQV7 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.76■□□□□ 0.43
PRDM9Q9NQV7 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PRDM9Q9NQV7 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PRDM9Q9NQV7 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.76■□□□□ 0.43
PRDM9Q9NQV7 HMGA1P5-201ENST00000412453 271 ntBASIC17.76■□□□□ 0.43
PRDM9Q9NQV7 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.76■□□□□ 0.43
PRDM9Q9NQV7 SLC25A3P1-201ENST00000443844 931 ntBASIC17.76■□□□□ 0.43
PRDM9Q9NQV7 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.76■□□□□ 0.43
PRDM9Q9NQV7 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PRDM9Q9NQV7 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.76■□□□□ 0.43
PRDM9Q9NQV7 AP003041.3-201ENST00000527151 707 ntBASIC17.76■□□□□ 0.43
PRDM9Q9NQV7 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.76■□□□□ 0.43
PRDM9Q9NQV7 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
PRDM9Q9NQV7 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PRDM9Q9NQV7 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PRDM9Q9NQV7 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PRDM9Q9NQV7 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PRDM9Q9NQV7 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PRDM9Q9NQV7 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRDM9Q9NQV7 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PRDM9Q9NQV7 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
PRDM9Q9NQV7 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRDM9Q9NQV7 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
PRDM9Q9NQV7 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRDM9Q9NQV7 AL138781.2-201ENST00000617896 1843 ntBASIC17.75■□□□□ 0.43
PRDM9Q9NQV7 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRDM9Q9NQV7 AL109659.2-201ENST00000606809 1674 ntBASIC17.75■□□□□ 0.43
PRDM9Q9NQV7 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.75■□□□□ 0.43
PRDM9Q9NQV7 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRDM9Q9NQV7 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRDM9Q9NQV7 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.75■□□□□ 0.43
PRDM9Q9NQV7 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.75■□□□□ 0.43
PRDM9Q9NQV7 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRDM9Q9NQV7 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.75■□□□□ 0.43
PRDM9Q9NQV7 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
PRDM9Q9NQV7 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
PRDM9Q9NQV7 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
PRDM9Q9NQV7 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
PRDM9Q9NQV7 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
PRDM9Q9NQV7 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PRDM9Q9NQV7 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRDM9Q9NQV7 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRDM9Q9NQV7 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.75■□□□□ 0.43
PRDM9Q9NQV7 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PRDM9Q9NQV7 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRDM9Q9NQV7 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
PRDM9Q9NQV7 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRDM9Q9NQV7 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRDM9Q9NQV7 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms