Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BRD9Q9H8M2 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.43■□□□□ 0.7
BRD9Q9H8M2 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
BRD9Q9H8M2 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BRD9Q9H8M2 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.43■□□□□ 0.7
BRD9Q9H8M2 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BRD9Q9H8M2 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BRD9Q9H8M2 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.43■□□□□ 0.7
BRD9Q9H8M2 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BRD9Q9H8M2 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BRD9Q9H8M2 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.43■□□□□ 0.7
BRD9Q9H8M2 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.43■□□□□ 0.7
BRD9Q9H8M2 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
BRD9Q9H8M2 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BRD9Q9H8M2 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
BRD9Q9H8M2 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
BRD9Q9H8M2 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BRD9Q9H8M2 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.42■□□□□ 0.7
BRD9Q9H8M2 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
BRD9Q9H8M2 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BRD9Q9H8M2 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
BRD9Q9H8M2 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BRD9Q9H8M2 AC004870.1-201ENST00000315132 882 ntBASIC19.42■□□□□ 0.7
BRD9Q9H8M2 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BRD9Q9H8M2 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BRD9Q9H8M2 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.42■□□□□ 0.7
BRD9Q9H8M2 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
BRD9Q9H8M2 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.42■□□□□ 0.7
BRD9Q9H8M2 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
BRD9Q9H8M2 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.42■□□□□ 0.7
BRD9Q9H8M2 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
BRD9Q9H8M2 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.42■□□□□ 0.7
BRD9Q9H8M2 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.42■□□□□ 0.7
BRD9Q9H8M2 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.42■□□□□ 0.7
BRD9Q9H8M2 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
BRD9Q9H8M2 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BRD9Q9H8M2 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.42■□□□□ 0.7
BRD9Q9H8M2 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
BRD9Q9H8M2 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BRD9Q9H8M2 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BRD9Q9H8M2 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.41■□□□□ 0.7
BRD9Q9H8M2 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
BRD9Q9H8M2 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.41■□□□□ 0.7
BRD9Q9H8M2 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.41■□□□□ 0.7
BRD9Q9H8M2 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
BRD9Q9H8M2 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
BRD9Q9H8M2 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
BRD9Q9H8M2 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BRD9Q9H8M2 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BRD9Q9H8M2 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
BRD9Q9H8M2 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BRD9Q9H8M2 AC246785.2-201ENST00000432512 513 ntBASIC19.41■□□□□ 0.7
BRD9Q9H8M2 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.41■□□□□ 0.7
BRD9Q9H8M2 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BRD9Q9H8M2 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BRD9Q9H8M2 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BRD9Q9H8M2 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BRD9Q9H8M2 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
BRD9Q9H8M2 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.41■□□□□ 0.7
BRD9Q9H8M2 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
BRD9Q9H8M2 MIR3180-1-201ENST00000580374 94 ntBASIC19.41■□□□□ 0.7
BRD9Q9H8M2 MIR3180-3-201ENST00000584616 94 ntBASIC19.41■□□□□ 0.7
BRD9Q9H8M2 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.41■□□□□ 0.7
BRD9Q9H8M2 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.41■□□□□ 0.7
BRD9Q9H8M2 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.41■□□□□ 0.7
BRD9Q9H8M2 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
BRD9Q9H8M2 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.41■□□□□ 0.7
BRD9Q9H8M2 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
BRD9Q9H8M2 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BRD9Q9H8M2 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.41■□□□□ 0.7
BRD9Q9H8M2 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.41■□□□□ 0.7
BRD9Q9H8M2 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.41■□□□□ 0.7
BRD9Q9H8M2 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
BRD9Q9H8M2 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
BRD9Q9H8M2 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.41■□□□□ 0.7
BRD9Q9H8M2 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BRD9Q9H8M2 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.4■□□□□ 0.7
BRD9Q9H8M2 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
BRD9Q9H8M2 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.4■□□□□ 0.7
BRD9Q9H8M2 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
BRD9Q9H8M2 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BRD9Q9H8M2 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
BRD9Q9H8M2 AL845331.1-201ENST00000424978 1190 ntBASIC19.4■□□□□ 0.7
BRD9Q9H8M2 KRT8P26-201ENST00000534154 1276 ntBASIC19.4■□□□□ 0.7
BRD9Q9H8M2 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.4■□□□□ 0.7
BRD9Q9H8M2 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.4■□□□□ 0.7
BRD9Q9H8M2 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
BRD9Q9H8M2 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
BRD9Q9H8M2 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BRD9Q9H8M2 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BRD9Q9H8M2 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BRD9Q9H8M2 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
BRD9Q9H8M2 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
BRD9Q9H8M2 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BRD9Q9H8M2 AL162741.1-201ENST00000565563 1558 ntBASIC19.4■□□□□ 0.7
BRD9Q9H8M2 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.39■□□□□ 0.7
BRD9Q9H8M2 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
BRD9Q9H8M2 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
BRD9Q9H8M2 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.39■□□□□ 0.7
BRD9Q9H8M2 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms