Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM2Q9C040 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
TRIM2Q9C040 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM2Q9C040 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM2Q9C040 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRIM2Q9C040 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRIM2Q9C040 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRIM2Q9C040 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TRIM2Q9C040 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
TRIM2Q9C040 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM2Q9C040 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM2Q9C040 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM2Q9C040 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM2Q9C040 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM2Q9C040 PRSS44-201ENST00000515154 1146 ntBASIC17.33■□□□□ 0.36
TRIM2Q9C040 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM2Q9C040 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM2Q9C040 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM2Q9C040 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM2Q9C040 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM2Q9C040 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM2Q9C040 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.33■□□□□ 0.36
TRIM2Q9C040 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM2Q9C040 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.32■□□□□ 0.36
TRIM2Q9C040 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.32■□□□□ 0.36
TRIM2Q9C040 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.32■□□□□ 0.36
TRIM2Q9C040 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM2Q9C040 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM2Q9C040 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM2Q9C040 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TRIM2Q9C040 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM2Q9C040 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM2Q9C040 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM2Q9C040 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
TRIM2Q9C040 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM2Q9C040 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM2Q9C040 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.32■□□□□ 0.36
TRIM2Q9C040 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM2Q9C040 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM2Q9C040 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM2Q9C040 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.32■□□□□ 0.36
TRIM2Q9C040 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.32■□□□□ 0.36
TRIM2Q9C040 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.32■□□□□ 0.36
TRIM2Q9C040 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TRIM2Q9C040 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.32■□□□□ 0.36
TRIM2Q9C040 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.32■□□□□ 0.36
TRIM2Q9C040 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM2Q9C040 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM2Q9C040 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.32■□□□□ 0.36
TRIM2Q9C040 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM2Q9C040 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.32■□□□□ 0.36
TRIM2Q9C040 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
TRIM2Q9C040 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM2Q9C040 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM2Q9C040 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.32■□□□□ 0.36
TRIM2Q9C040 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM2Q9C040 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM2Q9C040 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.32■□□□□ 0.36
TRIM2Q9C040 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM2Q9C040 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.32■□□□□ 0.36
TRIM2Q9C040 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM2Q9C040 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TRIM2Q9C040 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM2Q9C040 KRT16P1-201ENST00000399124 1418 ntBASIC17.31■□□□□ 0.36
TRIM2Q9C040 KRT8P11-201ENST00000409686 1436 ntBASIC17.31■□□□□ 0.36
TRIM2Q9C040 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.31■□□□□ 0.36
TRIM2Q9C040 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TRIM2Q9C040 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM2Q9C040 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM2Q9C040 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.31■□□□□ 0.36
TRIM2Q9C040 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM2Q9C040 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM2Q9C040 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TRIM2Q9C040 RARRES2P10-201ENST00000564312 460 ntBASIC17.31■□□□□ 0.36
TRIM2Q9C040 AC026271.3-201ENST00000571884 352 ntBASIC17.31■□□□□ 0.36
TRIM2Q9C040 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.31■□□□□ 0.36
TRIM2Q9C040 MIR4497-201ENST00000583208 89 ntBASIC17.31■□□□□ 0.36
TRIM2Q9C040 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.31■□□□□ 0.36
TRIM2Q9C040 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM2Q9C040 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.31■□□□□ 0.36
TRIM2Q9C040 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM2Q9C040 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM2Q9C040 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM2Q9C040 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
TRIM2Q9C040 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.31■□□□□ 0.36
TRIM2Q9C040 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM2Q9C040 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM2Q9C040 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.31■□□□□ 0.36
TRIM2Q9C040 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM2Q9C040 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.3■□□□□ 0.36
TRIM2Q9C040 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.3■□□□□ 0.36
TRIM2Q9C040 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM2Q9C040 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM2Q9C040 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM2Q9C040 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM2Q9C040 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM2Q9C040 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM2Q9C040 AC004951.3-201ENST00000418645 1148 ntBASIC17.3■□□□□ 0.36
TRIM2Q9C040 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM2Q9C040 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms