Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.44■□□□□ 0.7
FOXP3Q9BZS1 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
FOXP3Q9BZS1 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
FOXP3Q9BZS1 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
FOXP3Q9BZS1 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXP3Q9BZS1 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXP3Q9BZS1 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXP3Q9BZS1 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXP3Q9BZS1 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXP3Q9BZS1 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.44■□□□□ 0.7
FOXP3Q9BZS1 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXP3Q9BZS1 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXP3Q9BZS1 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
FOXP3Q9BZS1 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXP3Q9BZS1 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
FOXP3Q9BZS1 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXP3Q9BZS1 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.43■□□□□ 0.7
FOXP3Q9BZS1 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXP3Q9BZS1 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXP3Q9BZS1 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.43■□□□□ 0.7
FOXP3Q9BZS1 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXP3Q9BZS1 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
FOXP3Q9BZS1 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXP3Q9BZS1 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
FOXP3Q9BZS1 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXP3Q9BZS1 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.43■□□□□ 0.7
FOXP3Q9BZS1 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXP3Q9BZS1 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXP3Q9BZS1 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.43■□□□□ 0.7
FOXP3Q9BZS1 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.43■□□□□ 0.7
FOXP3Q9BZS1 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.43■□□□□ 0.7
FOXP3Q9BZS1 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
FOXP3Q9BZS1 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.43■□□□□ 0.7
FOXP3Q9BZS1 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.43■□□□□ 0.7
FOXP3Q9BZS1 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.43■□□□□ 0.7
FOXP3Q9BZS1 AC020763.4-201ENST00000623414 4170 ntBASIC19.43■□□□□ 0.7
FOXP3Q9BZS1 KRT17P2-201ENST00000300992 1314 ntBASIC19.43■□□□□ 0.7
FOXP3Q9BZS1 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.43■□□□□ 0.7
FOXP3Q9BZS1 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXP3Q9BZS1 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXP3Q9BZS1 ABALON-201ENST00000629058 1903 ntBASIC19.43■□□□□ 0.7
FOXP3Q9BZS1 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXP3Q9BZS1 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
FOXP3Q9BZS1 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.42■□□□□ 0.7
FOXP3Q9BZS1 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXP3Q9BZS1 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
FOXP3Q9BZS1 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.42■□□□□ 0.7
FOXP3Q9BZS1 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
FOXP3Q9BZS1 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXP3Q9BZS1 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.42■□□□□ 0.7
FOXP3Q9BZS1 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXP3Q9BZS1 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXP3Q9BZS1 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXP3Q9BZS1 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXP3Q9BZS1 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXP3Q9BZS1 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
FOXP3Q9BZS1 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXP3Q9BZS1 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.42■□□□□ 0.7
FOXP3Q9BZS1 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.42■□□□□ 0.7
FOXP3Q9BZS1 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.42■□□□□ 0.7
FOXP3Q9BZS1 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
FOXP3Q9BZS1 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXP3Q9BZS1 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXP3Q9BZS1 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.42■□□□□ 0.7
FOXP3Q9BZS1 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXP3Q9BZS1 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
FOXP3Q9BZS1 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.42■□□□□ 0.7
FOXP3Q9BZS1 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
FOXP3Q9BZS1 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.42■□□□□ 0.7
FOXP3Q9BZS1 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXP3Q9BZS1 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FOXP3Q9BZS1 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.41■□□□□ 0.7
FOXP3Q9BZS1 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
FOXP3Q9BZS1 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.41■□□□□ 0.7
FOXP3Q9BZS1 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FOXP3Q9BZS1 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
FOXP3Q9BZS1 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FOXP3Q9BZS1 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FOXP3Q9BZS1 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXP3Q9BZS1 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
FOXP3Q9BZS1 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.41■□□□□ 0.7
FOXP3Q9BZS1 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.41■□□□□ 0.7
FOXP3Q9BZS1 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.41■□□□□ 0.7
FOXP3Q9BZS1 AP001412.1-201ENST00000608405 714 ntBASIC19.41■□□□□ 0.7
FOXP3Q9BZS1 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
FOXP3Q9BZS1 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
FOXP3Q9BZS1 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.41■□□□□ 0.7
FOXP3Q9BZS1 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXP3Q9BZS1 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
FOXP3Q9BZS1 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXP3Q9BZS1 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FOXP3Q9BZS1 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FOXP3Q9BZS1 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.41■□□□□ 0.7
FOXP3Q9BZS1 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXP3Q9BZS1 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXP3Q9BZS1 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXP3Q9BZS1 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXP3Q9BZS1 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXP3Q9BZS1 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXP3Q9BZS1 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms