Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPNE1Q99829 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPNE1Q99829 AC138932.1-201ENST00000534164 6830 ntBASIC18.84■□□□□ 0.61
CPNE1Q99829 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPNE1Q99829 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPNE1Q99829 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.84■□□□□ 0.61
CPNE1Q99829 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CPNE1Q99829 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CPNE1Q99829 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.83■□□□□ 0.61
CPNE1Q99829 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.83■□□□□ 0.61
CPNE1Q99829 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
CPNE1Q99829 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.83■□□□□ 0.61
CPNE1Q99829 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
CPNE1Q99829 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.61
CPNE1Q99829 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
CPNE1Q99829 AC133681.1-201ENST00000465482 601 ntBASIC18.83■□□□□ 0.6
CPNE1Q99829 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CPNE1Q99829 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.83■□□□□ 0.6
CPNE1Q99829 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.83■□□□□ 0.6
CPNE1Q99829 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.83■□□□□ 0.6
CPNE1Q99829 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.83■□□□□ 0.6
CPNE1Q99829 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.83■□□□□ 0.6
CPNE1Q99829 AC124016.1-201ENST00000609552 612 ntBASIC18.83■□□□□ 0.6
CPNE1Q99829 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CPNE1Q99829 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
CPNE1Q99829 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CPNE1Q99829 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CPNE1Q99829 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CPNE1Q99829 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.83■□□□□ 0.6
CPNE1Q99829 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CPNE1Q99829 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CPNE1Q99829 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.83■□□□□ 0.6
CPNE1Q99829 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CPNE1Q99829 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CPNE1Q99829 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.83■□□□□ 0.6
CPNE1Q99829 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.83■□□□□ 0.6
CPNE1Q99829 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.83■□□□□ 0.6
CPNE1Q99829 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CPNE1Q99829 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CPNE1Q99829 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CPNE1Q99829 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
CPNE1Q99829 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CPNE1Q99829 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CPNE1Q99829 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CPNE1Q99829 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CPNE1Q99829 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CPNE1Q99829 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
CPNE1Q99829 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CPNE1Q99829 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
CPNE1Q99829 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CPNE1Q99829 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.82■□□□□ 0.6
CPNE1Q99829 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.82■□□□□ 0.6
CPNE1Q99829 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CPNE1Q99829 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
CPNE1Q99829 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
CPNE1Q99829 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
CPNE1Q99829 AC110285.5-201ENST00000611501 352 ntBASIC18.82■□□□□ 0.6
CPNE1Q99829 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.82■□□□□ 0.6
CPNE1Q99829 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.82■□□□□ 0.6
CPNE1Q99829 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CPNE1Q99829 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CPNE1Q99829 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CPNE1Q99829 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CPNE1Q99829 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
CPNE1Q99829 NOC2LP1-202ENST00000452600 2235 ntBASIC18.82■□□□□ 0.6
CPNE1Q99829 KRT8P32-201ENST00000512863 1461 ntBASIC18.82■□□□□ 0.6
CPNE1Q99829 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CPNE1Q99829 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CPNE1Q99829 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CPNE1Q99829 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CPNE1Q99829 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.82■□□□□ 0.6
CPNE1Q99829 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CPNE1Q99829 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE1Q99829 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE1Q99829 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.81■□□□□ 0.6
CPNE1Q99829 AL162741.1-201ENST00000565563 1558 ntBASIC18.81■□□□□ 0.6
CPNE1Q99829 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE1Q99829 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE1Q99829 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE1Q99829 ABALON-201ENST00000629058 1903 ntBASIC18.81■□□□□ 0.6
CPNE1Q99829 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE1Q99829 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE1Q99829 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CPNE1Q99829 ID1-201ENST00000376105 1233 ntBASIC18.81■□□□□ 0.6
CPNE1Q99829 NIFKP9-201ENST00000419265 221 ntBASIC18.81■□□□□ 0.6
CPNE1Q99829 AC004980.1-204ENST00000429707 299 ntBASIC18.81■□□□□ 0.6
CPNE1Q99829 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.81■□□□□ 0.6
CPNE1Q99829 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.81■□□□□ 0.6
CPNE1Q99829 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE1Q99829 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.81■□□□□ 0.6
CPNE1Q99829 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE1Q99829 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CPNE1Q99829 KRT8P3-201ENST00000519669 1449 ntBASIC18.81■□□□□ 0.6
CPNE1Q99829 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE1Q99829 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPNE1Q99829 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CPNE1Q99829 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CPNE1Q99829 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CPNE1Q99829 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.8■□□□□ 0.6
CPNE1Q99829 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms