Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC38A3Q99624 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.24■□□□□ 0.51
SLC38A3Q99624 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC38A3Q99624 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.24■□□□□ 0.51
SLC38A3Q99624 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
SLC38A3Q99624 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC38A3Q99624 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
SLC38A3Q99624 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC38A3Q99624 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC38A3Q99624 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC38A3Q99624 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC38A3Q99624 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.23■□□□□ 0.51
SLC38A3Q99624 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC38A3Q99624 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SLC38A3Q99624 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC38A3Q99624 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.23■□□□□ 0.51
SLC38A3Q99624 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
SLC38A3Q99624 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.23■□□□□ 0.51
SLC38A3Q99624 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC38A3Q99624 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.23■□□□□ 0.51
SLC38A3Q99624 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.23■□□□□ 0.51
SLC38A3Q99624 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC38A3Q99624 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC38A3Q99624 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC38A3Q99624 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC38A3Q99624 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC38A3Q99624 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SLC38A3Q99624 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
SLC38A3Q99624 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SLC38A3Q99624 STARP1-201ENST00000397973 869 ntBASIC18.23■□□□□ 0.51
SLC38A3Q99624 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
SLC38A3Q99624 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.23■□□□□ 0.51
SLC38A3Q99624 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.23■□□□□ 0.51
SLC38A3Q99624 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.23■□□□□ 0.51
SLC38A3Q99624 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
SLC38A3Q99624 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SLC38A3Q99624 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC38A3Q99624 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.23■□□□□ 0.51
SLC38A3Q99624 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
SLC38A3Q99624 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC38A3Q99624 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
SLC38A3Q99624 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SLC38A3Q99624 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
SLC38A3Q99624 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.23■□□□□ 0.51
SLC38A3Q99624 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC38A3Q99624 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.23■□□□□ 0.51
SLC38A3Q99624 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC38A3Q99624 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SLC38A3Q99624 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC38A3Q99624 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC38A3Q99624 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SLC38A3Q99624 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.22■□□□□ 0.51
SLC38A3Q99624 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SLC38A3Q99624 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC38A3Q99624 PCED1CP-201ENST00000419887 785 ntBASIC18.22■□□□□ 0.51
SLC38A3Q99624 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SLC38A3Q99624 AC034232.1-201ENST00000506026 1064 ntBASIC18.22■□□□□ 0.51
SLC38A3Q99624 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC38A3Q99624 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SLC38A3Q99624 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.22■□□□□ 0.51
SLC38A3Q99624 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SLC38A3Q99624 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SLC38A3Q99624 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SLC38A3Q99624 AP000550.4-202ENST00000639755 178 ntBASIC18.22■□□□□ 0.51
SLC38A3Q99624 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC38A3Q99624 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC38A3Q99624 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
SLC38A3Q99624 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SLC38A3Q99624 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
SLC38A3Q99624 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.22■□□□□ 0.51
SLC38A3Q99624 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC38A3Q99624 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
SLC38A3Q99624 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC38A3Q99624 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SLC38A3Q99624 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.21■□□□□ 0.51
SLC38A3Q99624 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC38A3Q99624 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.21■□□□□ 0.51
SLC38A3Q99624 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC38A3Q99624 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC38A3Q99624 FEM1AP3-201ENST00000403722 1741 ntBASIC18.21■□□□□ 0.51
SLC38A3Q99624 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.21■□□□□ 0.51
SLC38A3Q99624 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SLC38A3Q99624 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.21■□□□□ 0.51
SLC38A3Q99624 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC38A3Q99624 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.21■□□□□ 0.51
SLC38A3Q99624 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SLC38A3Q99624 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC38A3Q99624 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.21■□□□□ 0.51
SLC38A3Q99624 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.21■□□□□ 0.51
SLC38A3Q99624 FAM86EP-206ENST00000510506 987 ntBASIC18.21■□□□□ 0.51
SLC38A3Q99624 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.21■□□□□ 0.51
SLC38A3Q99624 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.21■□□□□ 0.51
SLC38A3Q99624 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.21■□□□□ 0.51
SLC38A3Q99624 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.21■□□□□ 0.51
SLC38A3Q99624 AC024243.1-201ENST00000609234 778 ntBASIC18.21■□□□□ 0.51
SLC38A3Q99624 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.21■□□□□ 0.51
SLC38A3Q99624 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SLC38A3Q99624 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SLC38A3Q99624 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SLC38A3Q99624 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms