Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SPENQ96T58 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SPENQ96T58 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.97■□□□□ 0.31
SPENQ96T58 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC16.97■□□□□ 0.31
SPENQ96T58 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.97■□□□□ 0.31
SPENQ96T58 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SPENQ96T58 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SPENQ96T58 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SPENQ96T58 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.97■□□□□ 0.31
SPENQ96T58 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.97■□□□□ 0.31
SPENQ96T58 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.97■□□□□ 0.31
SPENQ96T58 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SPENQ96T58 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC16.96■□□□□ 0.31
SPENQ96T58 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.96■□□□□ 0.31
SPENQ96T58 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SPENQ96T58 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SPENQ96T58 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SPENQ96T58 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.96■□□□□ 0.31
SPENQ96T58 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SPENQ96T58 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SPENQ96T58 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SPENQ96T58 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SPENQ96T58 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SPENQ96T58 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SPENQ96T58 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.96■□□□□ 0.31
SPENQ96T58 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.96■□□□□ 0.31
SPENQ96T58 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SPENQ96T58 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.96■□□□□ 0.31
SPENQ96T58 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.96■□□□□ 0.31
SPENQ96T58 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC16.96■□□□□ 0.31
SPENQ96T58 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.96■□□□□ 0.31
SPENQ96T58 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SPENQ96T58 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
SPENQ96T58 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
SPENQ96T58 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
SPENQ96T58 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.96■□□□□ 0.3
SPENQ96T58 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SPENQ96T58 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SPENQ96T58 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SPENQ96T58 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SPENQ96T58 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SPENQ96T58 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SPENQ96T58 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.95■□□□□ 0.3
SPENQ96T58 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SPENQ96T58 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.95■□□□□ 0.3
SPENQ96T58 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC16.95■□□□□ 0.3
SPENQ96T58 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SPENQ96T58 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SPENQ96T58 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.95■□□□□ 0.3
SPENQ96T58 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.95■□□□□ 0.3
SPENQ96T58 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.95■□□□□ 0.3
SPENQ96T58 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SPENQ96T58 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SPENQ96T58 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SPENQ96T58 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SPENQ96T58 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SPENQ96T58 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SPENQ96T58 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
SPENQ96T58 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
SPENQ96T58 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SPENQ96T58 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.95■□□□□ 0.3
SPENQ96T58 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SPENQ96T58 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SPENQ96T58 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.95■□□□□ 0.3
SPENQ96T58 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.95■□□□□ 0.3
SPENQ96T58 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SPENQ96T58 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SPENQ96T58 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SPENQ96T58 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SPENQ96T58 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SPENQ96T58 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SPENQ96T58 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SPENQ96T58 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SPENQ96T58 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC16.94■□□□□ 0.3
SPENQ96T58 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SPENQ96T58 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SPENQ96T58 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SPENQ96T58 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.94■□□□□ 0.3
SPENQ96T58 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SPENQ96T58 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SPENQ96T58 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.94■□□□□ 0.3
SPENQ96T58 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.94■□□□□ 0.3
SPENQ96T58 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.94■□□□□ 0.3
SPENQ96T58 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SPENQ96T58 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SPENQ96T58 AF228730.7-201ENST00000641842 219 ntBASIC16.94■□□□□ 0.3
SPENQ96T58 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SPENQ96T58 TCF3P1-201ENST00000423021 1937 ntBASIC16.94■□□□□ 0.3
SPENQ96T58 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
SPENQ96T58 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.94■□□□□ 0.3
SPENQ96T58 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SPENQ96T58 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.94■□□□□ 0.3
SPENQ96T58 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.94■□□□□ 0.3
SPENQ96T58 AC005332.3-201ENST00000589904 676 ntBASIC16.94■□□□□ 0.3
SPENQ96T58 AL158211.5-201ENST00000623583 2518 ntBASIC16.94■□□□□ 0.3
SPENQ96T58 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SPENQ96T58 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SPENQ96T58 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SPENQ96T58 AC005082.1-201ENST00000413042 2259 ntBASIC16.94■□□□□ 0.3
SPENQ96T58 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms