Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CDK5RAP1Q96SZ6 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDK5RAP1Q96SZ6 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.53■□□□□ 0.72
CDK5RAP1Q96SZ6 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CDK5RAP1Q96SZ6 AC034232.1-201ENST00000506026 1064 ntBASIC19.53■□□□□ 0.72
CDK5RAP1Q96SZ6 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDK5RAP1Q96SZ6 NTF6B-201ENST00000591913 560 ntBASIC19.53■□□□□ 0.72
CDK5RAP1Q96SZ6 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CDK5RAP1Q96SZ6 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDK5RAP1Q96SZ6 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDK5RAP1Q96SZ6 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDK5RAP1Q96SZ6 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDK5RAP1Q96SZ6 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDK5RAP1Q96SZ6 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CDK5RAP1Q96SZ6 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CDK5RAP1Q96SZ6 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CDK5RAP1Q96SZ6 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.52■□□□□ 0.72
CDK5RAP1Q96SZ6 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.52■□□□□ 0.72
CDK5RAP1Q96SZ6 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDK5RAP1Q96SZ6 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.52■□□□□ 0.72
CDK5RAP1Q96SZ6 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDK5RAP1Q96SZ6 ARMC10P1-201ENST00000313754 855 ntBASIC19.52■□□□□ 0.72
CDK5RAP1Q96SZ6 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.52■□□□□ 0.72
CDK5RAP1Q96SZ6 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.52■□□□□ 0.72
CDK5RAP1Q96SZ6 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.52■□□□□ 0.72
CDK5RAP1Q96SZ6 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.52■□□□□ 0.72
CDK5RAP1Q96SZ6 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.52■□□□□ 0.72
CDK5RAP1Q96SZ6 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CDK5RAP1Q96SZ6 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CDK5RAP1Q96SZ6 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.52■□□□□ 0.72
CDK5RAP1Q96SZ6 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.52■□□□□ 0.72
CDK5RAP1Q96SZ6 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.52■□□□□ 0.72
CDK5RAP1Q96SZ6 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.52■□□□□ 0.72
CDK5RAP1Q96SZ6 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.52■□□□□ 0.72
CDK5RAP1Q96SZ6 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.52■□□□□ 0.72
CDK5RAP1Q96SZ6 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.52■□□□□ 0.72
CDK5RAP1Q96SZ6 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.52■□□□□ 0.72
CDK5RAP1Q96SZ6 AC112497.1-201ENST00000624824 639 ntBASIC19.52■□□□□ 0.72
CDK5RAP1Q96SZ6 AC068587.9-201ENST00000641814 219 ntBASIC19.52■□□□□ 0.72
CDK5RAP1Q96SZ6 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CDK5RAP1Q96SZ6 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.52■□□□□ 0.72
CDK5RAP1Q96SZ6 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.52■□□□□ 0.72
CDK5RAP1Q96SZ6 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CDK5RAP1Q96SZ6 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.52■□□□□ 0.71
CDK5RAP1Q96SZ6 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.52■□□□□ 0.71
CDK5RAP1Q96SZ6 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CDK5RAP1Q96SZ6 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CDK5RAP1Q96SZ6 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
CDK5RAP1Q96SZ6 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.52■□□□□ 0.71
CDK5RAP1Q96SZ6 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CDK5RAP1Q96SZ6 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CDK5RAP1Q96SZ6 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDK5RAP1Q96SZ6 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CDK5RAP1Q96SZ6 AC008556.1-201ENST00000610908 2040 ntBASIC19.51■□□□□ 0.71
CDK5RAP1Q96SZ6 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.51■□□□□ 0.71
CDK5RAP1Q96SZ6 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDK5RAP1Q96SZ6 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDK5RAP1Q96SZ6 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.51■□□□□ 0.71
CDK5RAP1Q96SZ6 MIR564-202ENST00000385049 94 ntBASIC19.51■□□□□ 0.71
CDK5RAP1Q96SZ6 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.51■□□□□ 0.71
CDK5RAP1Q96SZ6 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDK5RAP1Q96SZ6 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.51■□□□□ 0.71
CDK5RAP1Q96SZ6 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.51■□□□□ 0.71
CDK5RAP1Q96SZ6 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.51■□□□□ 0.71
CDK5RAP1Q96SZ6 AC087388.1-201ENST00000571370 1112 ntBASIC19.51■□□□□ 0.71
CDK5RAP1Q96SZ6 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
CDK5RAP1Q96SZ6 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.51■□□□□ 0.71
CDK5RAP1Q96SZ6 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDK5RAP1Q96SZ6 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.51■□□□□ 0.71
CDK5RAP1Q96SZ6 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDK5RAP1Q96SZ6 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.51■□□□□ 0.71
CDK5RAP1Q96SZ6 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CDK5RAP1Q96SZ6 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.51■□□□□ 0.71
CDK5RAP1Q96SZ6 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CDK5RAP1Q96SZ6 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
CDK5RAP1Q96SZ6 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDK5RAP1Q96SZ6 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CDK5RAP1Q96SZ6 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDK5RAP1Q96SZ6 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDK5RAP1Q96SZ6 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
CDK5RAP1Q96SZ6 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDK5RAP1Q96SZ6 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
CDK5RAP1Q96SZ6 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDK5RAP1Q96SZ6 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.5■□□□□ 0.71
CDK5RAP1Q96SZ6 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDK5RAP1Q96SZ6 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDK5RAP1Q96SZ6 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.5■□□□□ 0.71
CDK5RAP1Q96SZ6 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDK5RAP1Q96SZ6 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDK5RAP1Q96SZ6 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDK5RAP1Q96SZ6 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CDK5RAP1Q96SZ6 STARP1-201ENST00000397973 869 ntBASIC19.5■□□□□ 0.71
CDK5RAP1Q96SZ6 GCSHP2-201ENST00000560971 527 ntBASIC19.5■□□□□ 0.71
CDK5RAP1Q96SZ6 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDK5RAP1Q96SZ6 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CDK5RAP1Q96SZ6 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDK5RAP1Q96SZ6 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDK5RAP1Q96SZ6 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDK5RAP1Q96SZ6 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.5■□□□□ 0.71
CDK5RAP1Q96SZ6 HOXB1-202ENST00000577092 1414 ntBASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms