Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
COL21A1Q96P44 AL160286.2-201ENST00000567150 934 ntBASIC17.8■□□□□ 0.44
COL21A1Q96P44 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.8■□□□□ 0.44
COL21A1Q96P44 CD177P1-201ENST00000606252 935 ntBASIC17.8■□□□□ 0.44
COL21A1Q96P44 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.8■□□□□ 0.44
COL21A1Q96P44 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.8■□□□□ 0.44
COL21A1Q96P44 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.8■□□□□ 0.44
COL21A1Q96P44 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL21A1Q96P44 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
COL21A1Q96P44 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL21A1Q96P44 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.8■□□□□ 0.44
COL21A1Q96P44 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.8■□□□□ 0.44
COL21A1Q96P44 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
COL21A1Q96P44 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL21A1Q96P44 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
COL21A1Q96P44 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
COL21A1Q96P44 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL21A1Q96P44 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.79■□□□□ 0.44
COL21A1Q96P44 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
COL21A1Q96P44 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
COL21A1Q96P44 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.79■□□□□ 0.44
COL21A1Q96P44 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.79■□□□□ 0.44
COL21A1Q96P44 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
COL21A1Q96P44 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.79■□□□□ 0.44
COL21A1Q96P44 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.79■□□□□ 0.44
COL21A1Q96P44 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.79■□□□□ 0.44
COL21A1Q96P44 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
COL21A1Q96P44 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
COL21A1Q96P44 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
COL21A1Q96P44 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
COL21A1Q96P44 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
COL21A1Q96P44 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
COL21A1Q96P44 AC093827.2-201ENST00000512654 315 ntBASIC17.79■□□□□ 0.44
COL21A1Q96P44 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.79■□□□□ 0.44
COL21A1Q96P44 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.79■□□□□ 0.44
COL21A1Q96P44 AC113410.3-201ENST00000623366 203 ntBASIC17.79■□□□□ 0.44
COL21A1Q96P44 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
COL21A1Q96P44 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
COL21A1Q96P44 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
COL21A1Q96P44 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
COL21A1Q96P44 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.79■□□□□ 0.44
COL21A1Q96P44 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.79■□□□□ 0.44
COL21A1Q96P44 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
COL21A1Q96P44 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
COL21A1Q96P44 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
COL21A1Q96P44 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
COL21A1Q96P44 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
COL21A1Q96P44 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
COL21A1Q96P44 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.79■□□□□ 0.44
COL21A1Q96P44 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COL21A1Q96P44 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COL21A1Q96P44 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
COL21A1Q96P44 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
COL21A1Q96P44 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COL21A1Q96P44 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COL21A1Q96P44 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COL21A1Q96P44 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COL21A1Q96P44 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.78■□□□□ 0.44
COL21A1Q96P44 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
COL21A1Q96P44 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.78■□□□□ 0.44
COL21A1Q96P44 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.78■□□□□ 0.44
COL21A1Q96P44 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.78■□□□□ 0.44
COL21A1Q96P44 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
COL21A1Q96P44 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
COL21A1Q96P44 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.78■□□□□ 0.44
COL21A1Q96P44 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.78■□□□□ 0.44
COL21A1Q96P44 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COL21A1Q96P44 AL031985.4-201ENST00000642138 673 ntBASIC17.78■□□□□ 0.44
COL21A1Q96P44 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
COL21A1Q96P44 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
COL21A1Q96P44 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
COL21A1Q96P44 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COL21A1Q96P44 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COL21A1Q96P44 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COL21A1Q96P44 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COL21A1Q96P44 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.77■□□□□ 0.44
COL21A1Q96P44 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
COL21A1Q96P44 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
COL21A1Q96P44 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
COL21A1Q96P44 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.77■□□□□ 0.44
COL21A1Q96P44 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
COL21A1Q96P44 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
COL21A1Q96P44 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
COL21A1Q96P44 AC005332.8-201ENST00000622750 2735 ntBASIC17.77■□□□□ 0.44
COL21A1Q96P44 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
COL21A1Q96P44 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
COL21A1Q96P44 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
COL21A1Q96P44 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
COL21A1Q96P44 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
COL21A1Q96P44 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
COL21A1Q96P44 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
COL21A1Q96P44 AC004980.1-204ENST00000429707 299 ntBASIC17.77■□□□□ 0.44
COL21A1Q96P44 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
COL21A1Q96P44 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
COL21A1Q96P44 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
COL21A1Q96P44 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.77■□□□□ 0.44
COL21A1Q96P44 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
COL21A1Q96P44 AL390961.4-201ENST00000623958 2535 ntBASIC17.77■□□□□ 0.44
COL21A1Q96P44 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
COL21A1Q96P44 FEM1AP3-201ENST00000403722 1741 ntBASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms