Protein–RNA interactions for Protein: Q96JH7

VCPIP1, Deubiquitinating protein VCIP135, humanhuman

Predictions only

Length 1,222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1Q96JH7 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.83■□□□□ 0.77
VCPIP1Q96JH7 MYC-208ENST00000641036 567 ntBASIC19.83■□□□□ 0.77
VCPIP1Q96JH7 AL109659.2-201ENST00000606809 1674 ntBASIC19.83■□□□□ 0.76
VCPIP1Q96JH7 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
VCPIP1Q96JH7 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
VCPIP1Q96JH7 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.83■□□□□ 0.76
VCPIP1Q96JH7 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
VCPIP1Q96JH7 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.83■□□□□ 0.76
VCPIP1Q96JH7 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
VCPIP1Q96JH7 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
VCPIP1Q96JH7 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
VCPIP1Q96JH7 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
VCPIP1Q96JH7 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
VCPIP1Q96JH7 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
VCPIP1Q96JH7 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VCPIP1Q96JH7 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
VCPIP1Q96JH7 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VCPIP1Q96JH7 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.82■□□□□ 0.76
VCPIP1Q96JH7 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VCPIP1Q96JH7 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
VCPIP1Q96JH7 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VCPIP1Q96JH7 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
VCPIP1Q96JH7 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VCPIP1Q96JH7 AL357033.4-201ENST00000617703 1807 ntBASIC19.82■□□□□ 0.76
VCPIP1Q96JH7 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VCPIP1Q96JH7 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.82■□□□□ 0.76
VCPIP1Q96JH7 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.82■□□□□ 0.76
VCPIP1Q96JH7 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.82■□□□□ 0.76
VCPIP1Q96JH7 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.82■□□□□ 0.76
VCPIP1Q96JH7 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.82■□□□□ 0.76
VCPIP1Q96JH7 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
VCPIP1Q96JH7 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.82■□□□□ 0.76
VCPIP1Q96JH7 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VCPIP1Q96JH7 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.81■□□□□ 0.76
VCPIP1Q96JH7 RCC2P3-201ENST00000418112 1537 ntBASIC19.81■□□□□ 0.76
VCPIP1Q96JH7 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VCPIP1Q96JH7 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
VCPIP1Q96JH7 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
VCPIP1Q96JH7 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
VCPIP1Q96JH7 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
VCPIP1Q96JH7 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VCPIP1Q96JH7 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.81■□□□□ 0.76
VCPIP1Q96JH7 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
VCPIP1Q96JH7 MFAP1P1-201ENST00000442257 1255 ntBASIC19.81■□□□□ 0.76
VCPIP1Q96JH7 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.81■□□□□ 0.76
VCPIP1Q96JH7 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.81■□□□□ 0.76
VCPIP1Q96JH7 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.81■□□□□ 0.76
VCPIP1Q96JH7 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.81■□□□□ 0.76
VCPIP1Q96JH7 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.81■□□□□ 0.76
VCPIP1Q96JH7 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.81■□□□□ 0.76
VCPIP1Q96JH7 Z99916.2-201ENST00000604037 246 ntBASIC19.81■□□□□ 0.76
VCPIP1Q96JH7 REXO1L10P-201ENST00000615707 1290 ntBASIC19.81■□□□□ 0.76
VCPIP1Q96JH7 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
VCPIP1Q96JH7 REXO1L12P-201ENST00000622156 912 ntBASIC19.81■□□□□ 0.76
VCPIP1Q96JH7 AC112777.1-201ENST00000540175 1423 ntBASIC19.81■□□□□ 0.76
VCPIP1Q96JH7 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VCPIP1Q96JH7 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.81■□□□□ 0.76
VCPIP1Q96JH7 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VCPIP1Q96JH7 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.81■□□□□ 0.76
VCPIP1Q96JH7 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.81■□□□□ 0.76
VCPIP1Q96JH7 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.81■□□□□ 0.76
VCPIP1Q96JH7 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
VCPIP1Q96JH7 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.81■□□□□ 0.76
VCPIP1Q96JH7 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
VCPIP1Q96JH7 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VCPIP1Q96JH7 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VCPIP1Q96JH7 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
VCPIP1Q96JH7 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VCPIP1Q96JH7 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.8■□□□□ 0.76
VCPIP1Q96JH7 AC079598.2-202ENST00000546624 1451 ntBASIC19.8■□□□□ 0.76
VCPIP1Q96JH7 AC104581.1-202ENST00000635932 2618 ntBASIC19.8■□□□□ 0.76
VCPIP1Q96JH7 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
VCPIP1Q96JH7 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VCPIP1Q96JH7 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.8■□□□□ 0.76
VCPIP1Q96JH7 KRT8P45-201ENST00000414328 1447 ntBASIC19.8■□□□□ 0.76
VCPIP1Q96JH7 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VCPIP1Q96JH7 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
VCPIP1Q96JH7 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.8■□□□□ 0.76
VCPIP1Q96JH7 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VCPIP1Q96JH7 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
VCPIP1Q96JH7 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VCPIP1Q96JH7 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
VCPIP1Q96JH7 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.8■□□□□ 0.76
VCPIP1Q96JH7 AL355355.2-201ENST00000442321 338 ntBASIC19.8■□□□□ 0.76
VCPIP1Q96JH7 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.8■□□□□ 0.76
VCPIP1Q96JH7 AC097488.1-201ENST00000507834 756 ntBASIC19.8■□□□□ 0.76
VCPIP1Q96JH7 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.8■□□□□ 0.76
VCPIP1Q96JH7 SLC25A1P4-201ENST00000567977 778 ntBASIC19.8■□□□□ 0.76
VCPIP1Q96JH7 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
VCPIP1Q96JH7 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
VCPIP1Q96JH7 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
VCPIP1Q96JH7 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.8■□□□□ 0.76
VCPIP1Q96JH7 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VCPIP1Q96JH7 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
VCPIP1Q96JH7 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VCPIP1Q96JH7 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VCPIP1Q96JH7 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
VCPIP1Q96JH7 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
VCPIP1Q96JH7 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
VCPIP1Q96JH7 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms