Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTP4Q96DX8 FAM207BP-201ENST00000447172 505 ntBASIC19.21■□□□□ 0.67
RTP4Q96DX8 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.21■□□□□ 0.67
RTP4Q96DX8 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
RTP4Q96DX8 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RTP4Q96DX8 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.21■□□□□ 0.67
RTP4Q96DX8 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.21■□□□□ 0.67
RTP4Q96DX8 AL499627.1-201ENST00000569373 2188 ntBASIC19.21■□□□□ 0.67
RTP4Q96DX8 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
RTP4Q96DX8 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTP4Q96DX8 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTP4Q96DX8 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.21■□□□□ 0.67
RTP4Q96DX8 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTP4Q96DX8 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTP4Q96DX8 AL357033.4-201ENST00000617703 1807 ntBASIC19.21■□□□□ 0.67
RTP4Q96DX8 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
RTP4Q96DX8 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
RTP4Q96DX8 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RTP4Q96DX8 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
RTP4Q96DX8 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
RTP4Q96DX8 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
RTP4Q96DX8 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RTP4Q96DX8 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.2■□□□□ 0.66
RTP4Q96DX8 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
RTP4Q96DX8 KRT8P45-201ENST00000414328 1447 ntBASIC19.2■□□□□ 0.66
RTP4Q96DX8 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RTP4Q96DX8 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RTP4Q96DX8 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.2■□□□□ 0.66
RTP4Q96DX8 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
RTP4Q96DX8 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.2■□□□□ 0.66
RTP4Q96DX8 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
RTP4Q96DX8 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RTP4Q96DX8 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RTP4Q96DX8 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.2■□□□□ 0.66
RTP4Q96DX8 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.2■□□□□ 0.66
RTP4Q96DX8 AP000692.2-201ENST00000608391 879 ntBASIC19.2■□□□□ 0.66
RTP4Q96DX8 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RTP4Q96DX8 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.2■□□□□ 0.66
RTP4Q96DX8 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RTP4Q96DX8 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
RTP4Q96DX8 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.2■□□□□ 0.66
RTP4Q96DX8 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RTP4Q96DX8 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RTP4Q96DX8 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTP4Q96DX8 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTP4Q96DX8 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.19■□□□□ 0.66
RTP4Q96DX8 AL162741.1-201ENST00000565563 1558 ntBASIC19.19■□□□□ 0.66
RTP4Q96DX8 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.19■□□□□ 0.66
RTP4Q96DX8 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTP4Q96DX8 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RTP4Q96DX8 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTP4Q96DX8 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RTP4Q96DX8 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTP4Q96DX8 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTP4Q96DX8 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.19■□□□□ 0.66
RTP4Q96DX8 TSPY7P-201ENST00000431358 1114 ntBASIC19.19■□□□□ 0.66
RTP4Q96DX8 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTP4Q96DX8 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RTP4Q96DX8 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RTP4Q96DX8 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.19■□□□□ 0.66
RTP4Q96DX8 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.19■□□□□ 0.66
RTP4Q96DX8 AP001412.1-201ENST00000608405 714 ntBASIC19.19■□□□□ 0.66
RTP4Q96DX8 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.19■□□□□ 0.66
RTP4Q96DX8 AL049637.2-201ENST00000641778 930 ntBASIC19.19■□□□□ 0.66
RTP4Q96DX8 FSCN1P1-201ENST00000568912 1481 ntBASIC19.19■□□□□ 0.66
RTP4Q96DX8 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RTP4Q96DX8 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTP4Q96DX8 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTP4Q96DX8 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTP4Q96DX8 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTP4Q96DX8 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTP4Q96DX8 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.19■□□□□ 0.66
RTP4Q96DX8 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTP4Q96DX8 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.19■□□□□ 0.66
RTP4Q96DX8 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTP4Q96DX8 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTP4Q96DX8 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.19■□□□□ 0.66
RTP4Q96DX8 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.19■□□□□ 0.66
RTP4Q96DX8 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
RTP4Q96DX8 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.18■□□□□ 0.66
RTP4Q96DX8 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTP4Q96DX8 AL135905.2-201ENST00000584934 1404 ntBASIC19.18■□□□□ 0.66
RTP4Q96DX8 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.18■□□□□ 0.66
RTP4Q96DX8 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTP4Q96DX8 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
RTP4Q96DX8 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
RTP4Q96DX8 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.18■□□□□ 0.66
RTP4Q96DX8 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.18■□□□□ 0.66
RTP4Q96DX8 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTP4Q96DX8 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTP4Q96DX8 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTP4Q96DX8 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
RTP4Q96DX8 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
RTP4Q96DX8 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.18■□□□□ 0.66
RTP4Q96DX8 ECEL1P3-201ENST00000427961 737 ntBASIC19.18■□□□□ 0.66
RTP4Q96DX8 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTP4Q96DX8 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RTP4Q96DX8 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.18■□□□□ 0.66
RTP4Q96DX8 REXO1L12P-201ENST00000622156 912 ntBASIC19.18■□□□□ 0.66
RTP4Q96DX8 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms