Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC39Q96DD0 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
LRRC39Q96DD0 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC39Q96DD0 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC39Q96DD0 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC39Q96DD0 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
LRRC39Q96DD0 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRRC39Q96DD0 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.02■□□□□ 0.64
LRRC39Q96DD0 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.02■□□□□ 0.64
LRRC39Q96DD0 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.02■□□□□ 0.64
LRRC39Q96DD0 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
LRRC39Q96DD0 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRRC39Q96DD0 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
LRRC39Q96DD0 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.02■□□□□ 0.64
LRRC39Q96DD0 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRRC39Q96DD0 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LRRC39Q96DD0 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.02■□□□□ 0.64
LRRC39Q96DD0 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRRC39Q96DD0 NIFKP9-201ENST00000419265 221 ntBASIC19.02■□□□□ 0.64
LRRC39Q96DD0 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.02■□□□□ 0.64
LRRC39Q96DD0 HLA-L-209ENST00000420110 1011 ntBASIC19.02■□□□□ 0.64
LRRC39Q96DD0 AC004980.1-204ENST00000429707 299 ntBASIC19.02■□□□□ 0.64
LRRC39Q96DD0 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.02■□□□□ 0.64
LRRC39Q96DD0 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.02■□□□□ 0.64
LRRC39Q96DD0 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.02■□□□□ 0.64
LRRC39Q96DD0 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.02■□□□□ 0.64
LRRC39Q96DD0 AC124016.1-201ENST00000609552 612 ntBASIC19.02■□□□□ 0.64
LRRC39Q96DD0 AL353708.3-201ENST00000610272 989 ntBASIC19.02■□□□□ 0.64
LRRC39Q96DD0 AC110285.5-201ENST00000611501 352 ntBASIC19.02■□□□□ 0.64
LRRC39Q96DD0 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.02■□□□□ 0.64
LRRC39Q96DD0 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.02■□□□□ 0.64
LRRC39Q96DD0 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.02■□□□□ 0.64
LRRC39Q96DD0 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
LRRC39Q96DD0 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
LRRC39Q96DD0 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
LRRC39Q96DD0 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
LRRC39Q96DD0 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.63
LRRC39Q96DD0 NOC2LP2-201ENST00000407594 1944 ntBASIC19.02■□□□□ 0.63
LRRC39Q96DD0 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.02■□□□□ 0.63
LRRC39Q96DD0 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LRRC39Q96DD0 AC112777.1-201ENST00000540175 1423 ntBASIC19.01■□□□□ 0.63
LRRC39Q96DD0 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
LRRC39Q96DD0 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRC39Q96DD0 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRC39Q96DD0 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
LRRC39Q96DD0 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.01■□□□□ 0.63
LRRC39Q96DD0 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRC39Q96DD0 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.01■□□□□ 0.63
LRRC39Q96DD0 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRC39Q96DD0 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.01■□□□□ 0.63
LRRC39Q96DD0 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
LRRC39Q96DD0 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.01■□□□□ 0.63
LRRC39Q96DD0 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LRRC39Q96DD0 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.01■□□□□ 0.63
LRRC39Q96DD0 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRC39Q96DD0 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRC39Q96DD0 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRC39Q96DD0 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRC39Q96DD0 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRC39Q96DD0 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRRC39Q96DD0 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19■□□□□ 0.63
LRRC39Q96DD0 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19■□□□□ 0.63
LRRC39Q96DD0 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
LRRC39Q96DD0 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
LRRC39Q96DD0 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
LRRC39Q96DD0 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19■□□□□ 0.63
LRRC39Q96DD0 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRRC39Q96DD0 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19■□□□□ 0.63
LRRC39Q96DD0 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRRC39Q96DD0 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19■□□□□ 0.63
LRRC39Q96DD0 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRRC39Q96DD0 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19■□□□□ 0.63
LRRC39Q96DD0 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
LRRC39Q96DD0 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19■□□□□ 0.63
LRRC39Q96DD0 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19■□□□□ 0.63
LRRC39Q96DD0 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19■□□□□ 0.63
LRRC39Q96DD0 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19■□□□□ 0.63
LRRC39Q96DD0 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
LRRC39Q96DD0 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19■□□□□ 0.63
LRRC39Q96DD0 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19■□□□□ 0.63
LRRC39Q96DD0 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19■□□□□ 0.63
LRRC39Q96DD0 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19■□□□□ 0.63
LRRC39Q96DD0 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19■□□□□ 0.63
LRRC39Q96DD0 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRRC39Q96DD0 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19■□□□□ 0.63
LRRC39Q96DD0 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
LRRC39Q96DD0 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRRC39Q96DD0 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
LRRC39Q96DD0 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
LRRC39Q96DD0 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
LRRC39Q96DD0 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRRC39Q96DD0 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRRC39Q96DD0 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19■□□□□ 0.63
LRRC39Q96DD0 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19■□□□□ 0.63
LRRC39Q96DD0 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
LRRC39Q96DD0 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19■□□□□ 0.63
LRRC39Q96DD0 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
LRRC39Q96DD0 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19■□□□□ 0.63
LRRC39Q96DD0 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
LRRC39Q96DD0 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms