Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC24.19■■□□□ 1.46
ZNF428Q96B54 KRT8P45-201ENST00000414328 1447 ntBASIC24.18■■□□□ 1.46
ZNF428Q96B54 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC24.18■■□□□ 1.46
ZNF428Q96B54 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
ZNF428Q96B54 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
ZNF428Q96B54 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
ZNF428Q96B54 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC24.18■■□□□ 1.46
ZNF428Q96B54 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC24.18■■□□□ 1.46
ZNF428Q96B54 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC24.18■■□□□ 1.46
ZNF428Q96B54 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC24.18■■□□□ 1.46
ZNF428Q96B54 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC24.18■■□□□ 1.46
ZNF428Q96B54 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
ZNF428Q96B54 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
ZNF428Q96B54 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
ZNF428Q96B54 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC24.18■■□□□ 1.46
ZNF428Q96B54 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC24.18■■□□□ 1.46
ZNF428Q96B54 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
ZNF428Q96B54 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC24.17■■□□□ 1.46
ZNF428Q96B54 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC24.17■■□□□ 1.46
ZNF428Q96B54 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
ZNF428Q96B54 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC24.17■■□□□ 1.46
ZNF428Q96B54 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
ZNF428Q96B54 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
ZNF428Q96B54 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
ZNF428Q96B54 MTMR9LP-203ENST00000426597 1545 ntBASIC24.17■■□□□ 1.46
ZNF428Q96B54 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
ZNF428Q96B54 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
ZNF428Q96B54 YBX1P2-201ENST00000489612 999 ntBASIC24.17■■□□□ 1.46
ZNF428Q96B54 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC24.17■■□□□ 1.46
ZNF428Q96B54 AC011558.1-201ENST00000623459 338 ntBASIC24.17■■□□□ 1.46
ZNF428Q96B54 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
ZNF428Q96B54 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
ZNF428Q96B54 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
ZNF428Q96B54 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
ZNF428Q96B54 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC24.17■■□□□ 1.46
ZNF428Q96B54 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC24.17■■□□□ 1.46
ZNF428Q96B54 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
ZNF428Q96B54 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
ZNF428Q96B54 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC24.16■■□□□ 1.46
ZNF428Q96B54 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
ZNF428Q96B54 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
ZNF428Q96B54 RCC2P3-201ENST00000418112 1537 ntBASIC24.16■■□□□ 1.46
ZNF428Q96B54 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC24.16■■□□□ 1.46
ZNF428Q96B54 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
ZNF428Q96B54 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
ZNF428Q96B54 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC24.16■■□□□ 1.46
ZNF428Q96B54 NFYC-AS1-201ENST00000606277 1687 ntBASIC24.16■■□□□ 1.46
ZNF428Q96B54 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
ZNF428Q96B54 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC24.16■■□□□ 1.46
ZNF428Q96B54 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
ZNF428Q96B54 AL023284.2-201ENST00000405850 579 ntBASIC24.16■■□□□ 1.46
ZNF428Q96B54 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
ZNF428Q96B54 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
ZNF428Q96B54 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
ZNF428Q96B54 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC24.16■■□□□ 1.46
ZNF428Q96B54 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC24.16■■□□□ 1.46
ZNF428Q96B54 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
ZNF428Q96B54 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
ZNF428Q96B54 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
ZNF428Q96B54 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
ZNF428Q96B54 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC24.16■■□□□ 1.46
ZNF428Q96B54 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC24.16■■□□□ 1.46
ZNF428Q96B54 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC24.16■■□□□ 1.46
ZNF428Q96B54 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
ZNF428Q96B54 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
ZNF428Q96B54 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC24.15■■□□□ 1.46
ZNF428Q96B54 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
ZNF428Q96B54 BX664615.1-201ENST00000443558 458 ntBASIC24.15■■□□□ 1.46
ZNF428Q96B54 AC022616.7-201ENST00000525383 220 ntBASIC24.15■■□□□ 1.46
ZNF428Q96B54 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC24.15■■□□□ 1.46
ZNF428Q96B54 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC24.15■■□□□ 1.46
ZNF428Q96B54 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC24.15■■□□□ 1.46
ZNF428Q96B54 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
ZNF428Q96B54 COBL-210ENST00000632460 1941 ntTSL 5 BASIC24.15■■□□□ 1.46
ZNF428Q96B54 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
ZNF428Q96B54 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
ZNF428Q96B54 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
ZNF428Q96B54 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
ZNF428Q96B54 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
ZNF428Q96B54 GPAT2P1-201ENST00000444924 1672 ntBASIC24.15■■□□□ 1.46
ZNF428Q96B54 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC24.14■■□□□ 1.46
ZNF428Q96B54 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC24.14■■□□□ 1.46
ZNF428Q96B54 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.46
ZNF428Q96B54 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC24.14■■□□□ 1.46
ZNF428Q96B54 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.46
ZNF428Q96B54 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
ZNF428Q96B54 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
ZNF428Q96B54 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
ZNF428Q96B54 Telomerase-vert.1-201ENST00000363312 438 ntBASIC24.14■■□□□ 1.45
ZNF428Q96B54 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC24.14■■□□□ 1.45
ZNF428Q96B54 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
ZNF428Q96B54 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
ZNF428Q96B54 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
ZNF428Q96B54 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
ZNF428Q96B54 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC24.14■■□□□ 1.45
ZNF428Q96B54 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
ZNF428Q96B54 AC141257.4-201ENST00000634557 245 ntBASIC24.14■■□□□ 1.45
ZNF428Q96B54 AC136944.6-201ENST00000634818 245 ntBASIC24.14■■□□□ 1.45
ZNF428Q96B54 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
ZNF428Q96B54 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms