Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
SEMA4DQ92854 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SEMA4DQ92854 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SEMA4DQ92854 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.23■□□□□ 0.83
SEMA4DQ92854 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SEMA4DQ92854 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SEMA4DQ92854 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.23■□□□□ 0.83
SEMA4DQ92854 SLC25A1P2-201ENST00000430693 912 ntBASIC20.23■□□□□ 0.83
SEMA4DQ92854 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.23■□□□□ 0.83
SEMA4DQ92854 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.23■□□□□ 0.83
SEMA4DQ92854 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SEMA4DQ92854 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.23■□□□□ 0.83
SEMA4DQ92854 BX088651.1-201ENST00000540551 451 ntBASIC20.23■□□□□ 0.83
SEMA4DQ92854 AL353719.1-201ENST00000566847 864 ntBASIC20.23■□□□□ 0.83
SEMA4DQ92854 AC092338.2-201ENST00000568827 1415 ntBASIC20.23■□□□□ 0.83
SEMA4DQ92854 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
SEMA4DQ92854 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SEMA4DQ92854 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.23■□□□□ 0.83
SEMA4DQ92854 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.23■□□□□ 0.83
SEMA4DQ92854 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SEMA4DQ92854 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.23■□□□□ 0.83
SEMA4DQ92854 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SEMA4DQ92854 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SEMA4DQ92854 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SEMA4DQ92854 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.22■□□□□ 0.83
SEMA4DQ92854 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SEMA4DQ92854 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.22■□□□□ 0.83
SEMA4DQ92854 WIZP1-201ENST00000531444 2299 ntBASIC20.22■□□□□ 0.83
SEMA4DQ92854 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
SEMA4DQ92854 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.22■□□□□ 0.83
SEMA4DQ92854 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.22■□□□□ 0.83
SEMA4DQ92854 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
SEMA4DQ92854 AP003041.3-201ENST00000527151 707 ntBASIC20.22■□□□□ 0.83
SEMA4DQ92854 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.22■□□□□ 0.83
SEMA4DQ92854 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SEMA4DQ92854 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SEMA4DQ92854 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SEMA4DQ92854 AL109659.2-201ENST00000606809 1674 ntBASIC20.22■□□□□ 0.83
SEMA4DQ92854 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
SEMA4DQ92854 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SEMA4DQ92854 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SEMA4DQ92854 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SEMA4DQ92854 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.21■□□□□ 0.83
SEMA4DQ92854 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SEMA4DQ92854 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SEMA4DQ92854 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SEMA4DQ92854 TSPY14P-201ENST00000303979 915 ntBASIC20.21■□□□□ 0.83
SEMA4DQ92854 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SEMA4DQ92854 AC007663.1-201ENST00000438948 1240 ntBASIC20.21■□□□□ 0.83
SEMA4DQ92854 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SEMA4DQ92854 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SEMA4DQ92854 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SEMA4DQ92854 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SEMA4DQ92854 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
SEMA4DQ92854 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.21■□□□□ 0.83
SEMA4DQ92854 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.21■□□□□ 0.83
SEMA4DQ92854 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SEMA4DQ92854 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SEMA4DQ92854 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SEMA4DQ92854 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.2■□□□□ 0.82
SEMA4DQ92854 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.2■□□□□ 0.82
SEMA4DQ92854 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SEMA4DQ92854 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SEMA4DQ92854 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SEMA4DQ92854 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SEMA4DQ92854 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.2■□□□□ 0.82
SEMA4DQ92854 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.2■□□□□ 0.82
SEMA4DQ92854 C2orf69P3-201ENST00000565542 1120 ntBASIC20.2■□□□□ 0.82
SEMA4DQ92854 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.2■□□□□ 0.82
SEMA4DQ92854 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SEMA4DQ92854 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.2■□□□□ 0.82
SEMA4DQ92854 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SEMA4DQ92854 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
SEMA4DQ92854 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
SEMA4DQ92854 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.2■□□□□ 0.82
SEMA4DQ92854 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.2■□□□□ 0.82
SEMA4DQ92854 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SEMA4DQ92854 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.2■□□□□ 0.82
SEMA4DQ92854 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SEMA4DQ92854 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SEMA4DQ92854 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SEMA4DQ92854 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SEMA4DQ92854 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.2■□□□□ 0.82
SEMA4DQ92854 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
SEMA4DQ92854 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SEMA4DQ92854 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SEMA4DQ92854 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SEMA4DQ92854 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SEMA4DQ92854 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SEMA4DQ92854 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.19■□□□□ 0.82
SEMA4DQ92854 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SEMA4DQ92854 AC104581.1-202ENST00000635932 2618 ntBASIC20.19■□□□□ 0.82
SEMA4DQ92854 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SEMA4DQ92854 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.19■□□□□ 0.82
SEMA4DQ92854 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.19■□□□□ 0.82
SEMA4DQ92854 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.19■□□□□ 0.82
SEMA4DQ92854 TSPY17P-201ENST00000450329 467 ntBASIC20.19■□□□□ 0.82
SEMA4DQ92854 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.19■□□□□ 0.82
SEMA4DQ92854 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.19■□□□□ 0.82
SEMA4DQ92854 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms