Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
USP6NLQ92738 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC21.29■■□□□ 1
USP6NLQ92738 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC21.29■■□□□ 1
USP6NLQ92738 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC21.29■■□□□ 1
USP6NLQ92738 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
USP6NLQ92738 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
USP6NLQ92738 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC21.29■■□□□ 1
USP6NLQ92738 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
USP6NLQ92738 TCF3P1-201ENST00000423021 1937 ntBASIC21.29■■□□□ 1
USP6NLQ92738 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.29■■□□□ 1
USP6NLQ92738 LINC01006-201ENST00000333319 2292 ntBASIC21.29■■□□□ 1
USP6NLQ92738 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.29■■□□□ 1
USP6NLQ92738 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.29■■□□□ 1
USP6NLQ92738 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
USP6NLQ92738 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC21.29■■□□□ 1
USP6NLQ92738 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
USP6NLQ92738 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
USP6NLQ92738 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC21.29■■□□□ 1
USP6NLQ92738 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
USP6NLQ92738 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
USP6NLQ92738 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
USP6NLQ92738 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
USP6NLQ92738 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC21.29■■□□□ 1
USP6NLQ92738 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC21.29■■□□□ 1
USP6NLQ92738 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
USP6NLQ92738 KRT18P23-201ENST00000435622 1283 ntBASIC21.29■■□□□ 1
USP6NLQ92738 KRT16P4-201ENST00000453883 522 ntBASIC21.29■■□□□ 1
USP6NLQ92738 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC21.29■■□□□ 1
USP6NLQ92738 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC21.29■■□□□ 1
USP6NLQ92738 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC21.29■■□□□ 1
USP6NLQ92738 CALM1-205ENST00000553542 877 ntTSL 5 BASIC21.29■■□□□ 1
USP6NLQ92738 CALM3-211ENST00000598871 561 ntTSL 4 BASIC21.29■■□□□ 1
USP6NLQ92738 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.29■■□□□ 1
USP6NLQ92738 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.29■■□□□ 1
USP6NLQ92738 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC21.29■■□□□ 1
USP6NLQ92738 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
USP6NLQ92738 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
USP6NLQ92738 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
USP6NLQ92738 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
USP6NLQ92738 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.29■■□□□ 1
USP6NLQ92738 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
USP6NLQ92738 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.28■■□□□ 1
USP6NLQ92738 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.28■■□□□ 1
USP6NLQ92738 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.28■■□□□ 1
USP6NLQ92738 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
USP6NLQ92738 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
USP6NLQ92738 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
USP6NLQ92738 MRPL3P1-201ENST00000400109 1033 ntBASIC21.28■■□□□ 1
USP6NLQ92738 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC21.28■■□□□ 1
USP6NLQ92738 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
USP6NLQ92738 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC21.28■■□□□ 1
USP6NLQ92738 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC21.28■■□□□ 1
USP6NLQ92738 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC21.28■■□□□ 1
USP6NLQ92738 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
USP6NLQ92738 LINC01711-201ENST00000598340 967 ntBASIC21.28■■□□□ 1
USP6NLQ92738 AL121912.1-201ENST00000603683 238 ntBASIC21.28■■□□□ 1
USP6NLQ92738 VPS51-217ENST00000639871 243 ntTSL 5 BASIC21.28■■□□□ 1
USP6NLQ92738 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21.28■■□□□ 1
USP6NLQ92738 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
USP6NLQ92738 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
USP6NLQ92738 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
USP6NLQ92738 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC21.28■■□□□ 1
USP6NLQ92738 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC21.28■■□□□ 1
USP6NLQ92738 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
USP6NLQ92738 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.27■■□□□ 1
USP6NLQ92738 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC21.27■■□□□ 1
USP6NLQ92738 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
USP6NLQ92738 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
USP6NLQ92738 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC21.27■■□□□ 1
USP6NLQ92738 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC21.27■■□□□ 1
USP6NLQ92738 AC233702.3-201ENST00000578656 1387 ntBASIC21.27■■□□□ 1
USP6NLQ92738 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
USP6NLQ92738 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
USP6NLQ92738 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
USP6NLQ92738 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC21.27■■□□□ 1
USP6NLQ92738 AC104819.1-201ENST00000504587 486 ntBASIC21.27■■□□□ 1
USP6NLQ92738 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC21.27■■□□□ 1
USP6NLQ92738 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC21.27■■□□□ 1
USP6NLQ92738 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC21.27■■□□□ 1
USP6NLQ92738 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
USP6NLQ92738 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC21.27■■□□□ 1
USP6NLQ92738 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC21.27■■□□□ 1
USP6NLQ92738 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC21.27■■□□□ 1
USP6NLQ92738 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
USP6NLQ92738 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
USP6NLQ92738 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC21.26■□□□□ 0.99
USP6NLQ92738 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.26■□□□□ 0.99
USP6NLQ92738 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
USP6NLQ92738 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP6NLQ92738 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP6NLQ92738 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC21.26■□□□□ 0.99
USP6NLQ92738 IGHV3-47-201ENST00000425060 335 ntBASIC21.26■□□□□ 0.99
USP6NLQ92738 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC21.26■□□□□ 0.99
USP6NLQ92738 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
USP6NLQ92738 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC21.26■□□□□ 0.99
USP6NLQ92738 AL662844.1-201ENST00000546340 181 ntBASIC21.26■□□□□ 0.99
USP6NLQ92738 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC21.26■□□□□ 0.99
USP6NLQ92738 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC21.26■□□□□ 0.99
USP6NLQ92738 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
USP6NLQ92738 AC008556.1-201ENST00000610908 2040 ntBASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms