Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPS4Y2Q8TD47 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.49■□□□□ 0.23
RPS4Y2Q8TD47 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPS4Y2Q8TD47 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPS4Y2Q8TD47 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPS4Y2Q8TD47 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
RPS4Y2Q8TD47 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPS4Y2Q8TD47 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RPS4Y2Q8TD47 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPS4Y2Q8TD47 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RPS4Y2Q8TD47 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RPS4Y2Q8TD47 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.48■□□□□ 0.23
RPS4Y2Q8TD47 ESPNP-201ENST00000270691 2015 ntBASIC16.48■□□□□ 0.23
RPS4Y2Q8TD47 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
RPS4Y2Q8TD47 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RPS4Y2Q8TD47 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.48■□□□□ 0.23
RPS4Y2Q8TD47 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RPS4Y2Q8TD47 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.48■□□□□ 0.23
RPS4Y2Q8TD47 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RPS4Y2Q8TD47 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RPS4Y2Q8TD47 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.48■□□□□ 0.23
RPS4Y2Q8TD47 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.48■□□□□ 0.23
RPS4Y2Q8TD47 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.48■□□□□ 0.23
RPS4Y2Q8TD47 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RPS4Y2Q8TD47 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.48■□□□□ 0.23
RPS4Y2Q8TD47 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RPS4Y2Q8TD47 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RPS4Y2Q8TD47 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RPS4Y2Q8TD47 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RPS4Y2Q8TD47 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RPS4Y2Q8TD47 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RPS4Y2Q8TD47 Six3os1_6.1-201ENST00000620790 196 ntBASIC16.48■□□□□ 0.23
RPS4Y2Q8TD47 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.48■□□□□ 0.23
RPS4Y2Q8TD47 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RPS4Y2Q8TD47 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RPS4Y2Q8TD47 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RPS4Y2Q8TD47 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.48■□□□□ 0.23
RPS4Y2Q8TD47 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RPS4Y2Q8TD47 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RPS4Y2Q8TD47 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RPS4Y2Q8TD47 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RPS4Y2Q8TD47 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RPS4Y2Q8TD47 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RPS4Y2Q8TD47 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.48■□□□□ 0.23
RPS4Y2Q8TD47 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RPS4Y2Q8TD47 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RPS4Y2Q8TD47 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
RPS4Y2Q8TD47 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RPS4Y2Q8TD47 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RPS4Y2Q8TD47 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RPS4Y2Q8TD47 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RPS4Y2Q8TD47 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
RPS4Y2Q8TD47 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RPS4Y2Q8TD47 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RPS4Y2Q8TD47 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RPS4Y2Q8TD47 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RPS4Y2Q8TD47 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
RPS4Y2Q8TD47 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RPS4Y2Q8TD47 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RPS4Y2Q8TD47 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.47■□□□□ 0.23
RPS4Y2Q8TD47 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
RPS4Y2Q8TD47 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.47■□□□□ 0.23
RPS4Y2Q8TD47 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RPS4Y2Q8TD47 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RPS4Y2Q8TD47 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RPS4Y2Q8TD47 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
RPS4Y2Q8TD47 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RPS4Y2Q8TD47 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.47■□□□□ 0.23
RPS4Y2Q8TD47 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.47■□□□□ 0.23
RPS4Y2Q8TD47 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RPS4Y2Q8TD47 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
RPS4Y2Q8TD47 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RPS4Y2Q8TD47 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RPS4Y2Q8TD47 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RPS4Y2Q8TD47 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.47■□□□□ 0.23
RPS4Y2Q8TD47 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
RPS4Y2Q8TD47 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RPS4Y2Q8TD47 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RPS4Y2Q8TD47 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RPS4Y2Q8TD47 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
RPS4Y2Q8TD47 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.46■□□□□ 0.23
RPS4Y2Q8TD47 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
RPS4Y2Q8TD47 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.46■□□□□ 0.23
RPS4Y2Q8TD47 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RPS4Y2Q8TD47 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.46■□□□□ 0.23
RPS4Y2Q8TD47 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RPS4Y2Q8TD47 KRT8P45-201ENST00000414328 1447 ntBASIC16.46■□□□□ 0.23
RPS4Y2Q8TD47 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RPS4Y2Q8TD47 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.23
RPS4Y2Q8TD47 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RPS4Y2Q8TD47 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
RPS4Y2Q8TD47 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RPS4Y2Q8TD47 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.46■□□□□ 0.23
RPS4Y2Q8TD47 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
RPS4Y2Q8TD47 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RPS4Y2Q8TD47 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RPS4Y2Q8TD47 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RPS4Y2Q8TD47 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RPS4Y2Q8TD47 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
RPS4Y2Q8TD47 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms