Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
SHKBP1Q8TBC3 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.76■□□□□ 0.75
SHKBP1Q8TBC3 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SHKBP1Q8TBC3 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
SHKBP1Q8TBC3 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
SHKBP1Q8TBC3 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.76■□□□□ 0.75
SHKBP1Q8TBC3 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SHKBP1Q8TBC3 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.76■□□□□ 0.75
SHKBP1Q8TBC3 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SHKBP1Q8TBC3 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SHKBP1Q8TBC3 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.76■□□□□ 0.75
SHKBP1Q8TBC3 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.76■□□□□ 0.75
SHKBP1Q8TBC3 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.76■□□□□ 0.75
SHKBP1Q8TBC3 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.76■□□□□ 0.75
SHKBP1Q8TBC3 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
SHKBP1Q8TBC3 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.76■□□□□ 0.75
SHKBP1Q8TBC3 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SHKBP1Q8TBC3 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SHKBP1Q8TBC3 AC004408.2-201ENST00000623613 2777 ntBASIC19.76■□□□□ 0.75
SHKBP1Q8TBC3 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.76■□□□□ 0.75
SHKBP1Q8TBC3 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SHKBP1Q8TBC3 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SHKBP1Q8TBC3 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SHKBP1Q8TBC3 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SHKBP1Q8TBC3 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SHKBP1Q8TBC3 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SHKBP1Q8TBC3 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.75■□□□□ 0.75
SHKBP1Q8TBC3 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SHKBP1Q8TBC3 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
SHKBP1Q8TBC3 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.75■□□□□ 0.75
SHKBP1Q8TBC3 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SHKBP1Q8TBC3 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
SHKBP1Q8TBC3 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.75■□□□□ 0.75
SHKBP1Q8TBC3 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SHKBP1Q8TBC3 AL023284.2-201ENST00000405850 579 ntBASIC19.75■□□□□ 0.75
SHKBP1Q8TBC3 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.75■□□□□ 0.75
SHKBP1Q8TBC3 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.75■□□□□ 0.75
SHKBP1Q8TBC3 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SHKBP1Q8TBC3 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.75■□□□□ 0.75
SHKBP1Q8TBC3 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
SHKBP1Q8TBC3 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
SHKBP1Q8TBC3 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SHKBP1Q8TBC3 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.75■□□□□ 0.75
SHKBP1Q8TBC3 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
SHKBP1Q8TBC3 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SHKBP1Q8TBC3 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SHKBP1Q8TBC3 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SHKBP1Q8TBC3 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
SHKBP1Q8TBC3 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SHKBP1Q8TBC3 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SHKBP1Q8TBC3 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SHKBP1Q8TBC3 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
SHKBP1Q8TBC3 SPDYE13P-201ENST00000445314 798 ntBASIC19.74■□□□□ 0.75
SHKBP1Q8TBC3 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.74■□□□□ 0.75
SHKBP1Q8TBC3 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
SHKBP1Q8TBC3 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.74■□□□□ 0.75
SHKBP1Q8TBC3 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SHKBP1Q8TBC3 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.74■□□□□ 0.75
SHKBP1Q8TBC3 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SHKBP1Q8TBC3 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SHKBP1Q8TBC3 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SHKBP1Q8TBC3 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
SHKBP1Q8TBC3 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SHKBP1Q8TBC3 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SHKBP1Q8TBC3 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.74■□□□□ 0.75
SHKBP1Q8TBC3 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SHKBP1Q8TBC3 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.74■□□□□ 0.75
SHKBP1Q8TBC3 AC036111.1-201ENST00000533973 1582 ntBASIC19.74■□□□□ 0.75
SHKBP1Q8TBC3 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
SHKBP1Q8TBC3 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.74■□□□□ 0.75
SHKBP1Q8TBC3 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SHKBP1Q8TBC3 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHKBP1Q8TBC3 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SHKBP1Q8TBC3 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.73■□□□□ 0.75
SHKBP1Q8TBC3 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.73■□□□□ 0.75
SHKBP1Q8TBC3 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.73■□□□□ 0.75
SHKBP1Q8TBC3 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.73■□□□□ 0.75
SHKBP1Q8TBC3 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHKBP1Q8TBC3 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHKBP1Q8TBC3 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
SHKBP1Q8TBC3 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHKBP1Q8TBC3 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SHKBP1Q8TBC3 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SHKBP1Q8TBC3 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHKBP1Q8TBC3 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SHKBP1Q8TBC3 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.73■□□□□ 0.75
SHKBP1Q8TBC3 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.73■□□□□ 0.75
SHKBP1Q8TBC3 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHKBP1Q8TBC3 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
SHKBP1Q8TBC3 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SHKBP1Q8TBC3 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
SHKBP1Q8TBC3 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SHKBP1Q8TBC3 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.73■□□□□ 0.75
SHKBP1Q8TBC3 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.73■□□□□ 0.75
SHKBP1Q8TBC3 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.73■□□□□ 0.75
SHKBP1Q8TBC3 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.73■□□□□ 0.75
SHKBP1Q8TBC3 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.73■□□□□ 0.75
SHKBP1Q8TBC3 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHKBP1Q8TBC3 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
SHKBP1Q8TBC3 AC069148.1-201ENST00000608741 768 ntBASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms