Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
LMO3Q8TAP4 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
LMO3Q8TAP4 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.19■□□□□ 0.82
LMO3Q8TAP4 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LMO3Q8TAP4 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
LMO3Q8TAP4 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LMO3Q8TAP4 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LMO3Q8TAP4 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.19■□□□□ 0.82
LMO3Q8TAP4 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LMO3Q8TAP4 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LMO3Q8TAP4 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LMO3Q8TAP4 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LMO3Q8TAP4 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
LMO3Q8TAP4 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.18■□□□□ 0.82
LMO3Q8TAP4 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LMO3Q8TAP4 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LMO3Q8TAP4 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LMO3Q8TAP4 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
LMO3Q8TAP4 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
LMO3Q8TAP4 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.18■□□□□ 0.82
LMO3Q8TAP4 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LMO3Q8TAP4 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LMO3Q8TAP4 KRT17P2-201ENST00000300992 1314 ntBASIC20.18■□□□□ 0.82
LMO3Q8TAP4 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
LMO3Q8TAP4 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LMO3Q8TAP4 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LMO3Q8TAP4 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LMO3Q8TAP4 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
LMO3Q8TAP4 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LMO3Q8TAP4 AC073592.3-201ENST00000625118 1834 ntBASIC20.18■□□□□ 0.82
LMO3Q8TAP4 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.18■□□□□ 0.82
LMO3Q8TAP4 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LMO3Q8TAP4 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.17■□□□□ 0.82
LMO3Q8TAP4 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
LMO3Q8TAP4 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.17■□□□□ 0.82
LMO3Q8TAP4 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
LMO3Q8TAP4 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LMO3Q8TAP4 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LMO3Q8TAP4 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
LMO3Q8TAP4 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.17■□□□□ 0.82
LMO3Q8TAP4 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.17■□□□□ 0.82
LMO3Q8TAP4 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
LMO3Q8TAP4 AL596275.1-201ENST00000423464 877 ntBASIC20.17■□□□□ 0.82
LMO3Q8TAP4 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.17■□□□□ 0.82
LMO3Q8TAP4 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
LMO3Q8TAP4 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LMO3Q8TAP4 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LMO3Q8TAP4 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LMO3Q8TAP4 KRT8P45-201ENST00000414328 1447 ntBASIC20.17■□□□□ 0.82
LMO3Q8TAP4 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.17■□□□□ 0.82
LMO3Q8TAP4 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.17■□□□□ 0.82
LMO3Q8TAP4 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LMO3Q8TAP4 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.17■□□□□ 0.82
LMO3Q8TAP4 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LMO3Q8TAP4 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.16■□□□□ 0.82
LMO3Q8TAP4 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.16■□□□□ 0.82
LMO3Q8TAP4 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
LMO3Q8TAP4 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LMO3Q8TAP4 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
LMO3Q8TAP4 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
LMO3Q8TAP4 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LMO3Q8TAP4 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LMO3Q8TAP4 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LMO3Q8TAP4 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LMO3Q8TAP4 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.16■□□□□ 0.82
LMO3Q8TAP4 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.16■□□□□ 0.82
LMO3Q8TAP4 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LMO3Q8TAP4 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.16■□□□□ 0.82
LMO3Q8TAP4 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.16■□□□□ 0.82
LMO3Q8TAP4 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.16■□□□□ 0.82
LMO3Q8TAP4 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.16■□□□□ 0.82
LMO3Q8TAP4 AC066615.1-201ENST00000640911 628 ntBASIC20.16■□□□□ 0.82
LMO3Q8TAP4 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.16■□□□□ 0.82
LMO3Q8TAP4 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LMO3Q8TAP4 KRT8P9-201ENST00000558927 1449 ntBASIC20.16■□□□□ 0.82
LMO3Q8TAP4 AC092338.2-201ENST00000568827 1415 ntBASIC20.16■□□□□ 0.82
LMO3Q8TAP4 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
LMO3Q8TAP4 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.16■□□□□ 0.82
LMO3Q8TAP4 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
LMO3Q8TAP4 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.16■□□□□ 0.82
LMO3Q8TAP4 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.16■□□□□ 0.82
LMO3Q8TAP4 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LMO3Q8TAP4 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LMO3Q8TAP4 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LMO3Q8TAP4 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
LMO3Q8TAP4 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LMO3Q8TAP4 MIR564-202ENST00000385049 94 ntBASIC20.15■□□□□ 0.82
LMO3Q8TAP4 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.15■□□□□ 0.82
LMO3Q8TAP4 MIR1238-201ENST00000408483 83 ntBASIC20.15■□□□□ 0.82
LMO3Q8TAP4 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.15■□□□□ 0.82
LMO3Q8TAP4 KRT18P41-201ENST00000518924 1277 ntBASIC20.15■□□□□ 0.82
LMO3Q8TAP4 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
LMO3Q8TAP4 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.15■□□□□ 0.82
LMO3Q8TAP4 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LMO3Q8TAP4 AL353719.1-201ENST00000566847 864 ntBASIC20.15■□□□□ 0.82
LMO3Q8TAP4 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.15■□□□□ 0.82
LMO3Q8TAP4 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LMO3Q8TAP4 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.15■□□□□ 0.82
LMO3Q8TAP4 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.15■□□□□ 0.82
LMO3Q8TAP4 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms