Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 CKBP1-201ENST00000565489 1086 ntBASIC16■□□□□ 0.15
CLDND2Q8NHS1 WWOX-216ENST00000569818 525 ntBASIC16■□□□□ 0.15
CLDND2Q8NHS1 AL023803.3-201ENST00000615559 522 ntBASIC16■□□□□ 0.15
CLDND2Q8NHS1 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLDND2Q8NHS1 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLDND2Q8NHS1 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16■□□□□ 0.15
CLDND2Q8NHS1 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16■□□□□ 0.15
CLDND2Q8NHS1 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLDND2Q8NHS1 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLDND2Q8NHS1 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLDND2Q8NHS1 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLDND2Q8NHS1 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16■□□□□ 0.15
CLDND2Q8NHS1 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CLDND2Q8NHS1 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC15.99■□□□□ 0.15
CLDND2Q8NHS1 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC15.99■□□□□ 0.15
CLDND2Q8NHS1 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDND2Q8NHS1 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC15.99■□□□□ 0.15
CLDND2Q8NHS1 AC007613.1-201ENST00000572811 2597 ntBASIC15.99■□□□□ 0.15
CLDND2Q8NHS1 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CLDND2Q8NHS1 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDND2Q8NHS1 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC15.99■□□□□ 0.15
CLDND2Q8NHS1 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CLDND2Q8NHS1 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CLDND2Q8NHS1 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC15.99■□□□□ 0.15
CLDND2Q8NHS1 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDND2Q8NHS1 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDND2Q8NHS1 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDND2Q8NHS1 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
CLDND2Q8NHS1 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
CLDND2Q8NHS1 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC15.99■□□□□ 0.15
CLDND2Q8NHS1 CA15P1-201ENST00000481698 905 ntBASIC15.99■□□□□ 0.15
CLDND2Q8NHS1 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLDND2Q8NHS1 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC15.99■□□□□ 0.15
CLDND2Q8NHS1 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CLDND2Q8NHS1 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC15.99■□□□□ 0.15
CLDND2Q8NHS1 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC15.99■□□□□ 0.15
CLDND2Q8NHS1 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC15.99■□□□□ 0.15
CLDND2Q8NHS1 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDND2Q8NHS1 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLDND2Q8NHS1 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CLDND2Q8NHS1 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC15.99■□□□□ 0.15
CLDND2Q8NHS1 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLDND2Q8NHS1 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC15.99■□□□□ 0.15
CLDND2Q8NHS1 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDND2Q8NHS1 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLDND2Q8NHS1 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDND2Q8NHS1 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDND2Q8NHS1 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CLDND2Q8NHS1 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLDND2Q8NHS1 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC15.99■□□□□ 0.15
CLDND2Q8NHS1 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDND2Q8NHS1 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC15.99■□□□□ 0.15
CLDND2Q8NHS1 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CLDND2Q8NHS1 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDND2Q8NHS1 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDND2Q8NHS1 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDND2Q8NHS1 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC15.98■□□□□ 0.15
CLDND2Q8NHS1 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDND2Q8NHS1 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDND2Q8NHS1 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDND2Q8NHS1 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CLDND2Q8NHS1 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDND2Q8NHS1 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDND2Q8NHS1 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDND2Q8NHS1 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDND2Q8NHS1 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC15.98■□□□□ 0.15
CLDND2Q8NHS1 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC15.98■□□□□ 0.15
CLDND2Q8NHS1 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDND2Q8NHS1 AL353719.1-201ENST00000566847 864 ntBASIC15.98■□□□□ 0.15
CLDND2Q8NHS1 AC087388.1-201ENST00000571370 1112 ntBASIC15.98■□□□□ 0.15
CLDND2Q8NHS1 AL138966.2-201ENST00000621997 464 ntBASIC15.98■□□□□ 0.15
CLDND2Q8NHS1 Z82202.1-201ENST00000623446 1880 ntBASIC15.98■□□□□ 0.15
CLDND2Q8NHS1 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC15.98■□□□□ 0.15
CLDND2Q8NHS1 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC15.98■□□□□ 0.15
CLDND2Q8NHS1 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDND2Q8NHS1 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDND2Q8NHS1 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDND2Q8NHS1 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDND2Q8NHS1 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC15.98■□□□□ 0.15
CLDND2Q8NHS1 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC15.98■□□□□ 0.15
CLDND2Q8NHS1 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC15.97■□□□□ 0.15
CLDND2Q8NHS1 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDND2Q8NHS1 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
CLDND2Q8NHS1 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLDND2Q8NHS1 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
CLDND2Q8NHS1 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDND2Q8NHS1 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDND2Q8NHS1 AR-207ENST00000612010 3896 ntTSL 5 BASIC15.97■□□□□ 0.15
CLDND2Q8NHS1 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDND2Q8NHS1 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC15.97■□□□□ 0.15
CLDND2Q8NHS1 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDND2Q8NHS1 AC117947.1-201ENST00000427448 529 ntBASIC15.97■□□□□ 0.15
CLDND2Q8NHS1 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC15.97■□□□□ 0.15
CLDND2Q8NHS1 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC15.97■□□□□ 0.15
CLDND2Q8NHS1 GXYLT1P6-201ENST00000456472 1187 ntBASIC15.97■□□□□ 0.15
CLDND2Q8NHS1 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CLDND2Q8NHS1 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CLDND2Q8NHS1 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CLDND2Q8NHS1 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLDND2Q8NHS1 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms