Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC148Q8NFR7 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC148Q8NFR7 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
CCDC148Q8NFR7 CRAT-202ENST00000393384 973 ntTSL 2 BASIC21.68■■□□□ 1.06
CCDC148Q8NFR7 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.68■■□□□ 1.06
CCDC148Q8NFR7 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC21.68■■□□□ 1.06
CCDC148Q8NFR7 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.68■■□□□ 1.06
CCDC148Q8NFR7 AC010653.2-201ENST00000623505 997 ntBASIC21.68■■□□□ 1.06
CCDC148Q8NFR7 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC21.68■■□□□ 1.06
CCDC148Q8NFR7 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC21.68■■□□□ 1.06
CCDC148Q8NFR7 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
CCDC148Q8NFR7 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC148Q8NFR7 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC148Q8NFR7 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC21.68■■□□□ 1.06
CCDC148Q8NFR7 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC148Q8NFR7 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC148Q8NFR7 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
CCDC148Q8NFR7 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC148Q8NFR7 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CCDC148Q8NFR7 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC148Q8NFR7 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC21.67■■□□□ 1.06
CCDC148Q8NFR7 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC148Q8NFR7 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC148Q8NFR7 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC21.67■■□□□ 1.06
CCDC148Q8NFR7 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC148Q8NFR7 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC148Q8NFR7 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC21.67■■□□□ 1.06
CCDC148Q8NFR7 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC148Q8NFR7 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.67■■□□□ 1.06
CCDC148Q8NFR7 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
CCDC148Q8NFR7 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC21.67■■□□□ 1.06
CCDC148Q8NFR7 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC21.67■■□□□ 1.06
CCDC148Q8NFR7 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC148Q8NFR7 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
CCDC148Q8NFR7 AC008622.2-201ENST00000617006 1229 ntBASIC21.67■■□□□ 1.06
CCDC148Q8NFR7 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CCDC148Q8NFR7 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC148Q8NFR7 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC21.67■■□□□ 1.06
CCDC148Q8NFR7 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC148Q8NFR7 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
CCDC148Q8NFR7 RCC2P3-201ENST00000418112 1537 ntBASIC21.66■■□□□ 1.06
CCDC148Q8NFR7 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC148Q8NFR7 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
CCDC148Q8NFR7 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC21.66■■□□□ 1.06
CCDC148Q8NFR7 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC148Q8NFR7 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC148Q8NFR7 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC21.66■■□□□ 1.06
CCDC148Q8NFR7 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC148Q8NFR7 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CCDC148Q8NFR7 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC21.66■■□□□ 1.06
CCDC148Q8NFR7 AC007663.1-201ENST00000438948 1240 ntBASIC21.66■■□□□ 1.06
CCDC148Q8NFR7 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC21.66■■□□□ 1.06
CCDC148Q8NFR7 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC21.66■■□□□ 1.06
CCDC148Q8NFR7 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CCDC148Q8NFR7 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC148Q8NFR7 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
CCDC148Q8NFR7 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC148Q8NFR7 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC148Q8NFR7 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC148Q8NFR7 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC148Q8NFR7 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC148Q8NFR7 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC148Q8NFR7 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC148Q8NFR7 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC21.65■■□□□ 1.06
CCDC148Q8NFR7 LINC01568-207ENST00000641790 1380 ntBASIC21.65■■□□□ 1.06
CCDC148Q8NFR7 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC148Q8NFR7 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.65■■□□□ 1.06
CCDC148Q8NFR7 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC148Q8NFR7 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC21.65■■□□□ 1.06
CCDC148Q8NFR7 AP003041.3-201ENST00000527151 707 ntBASIC21.65■■□□□ 1.06
CCDC148Q8NFR7 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC21.65■■□□□ 1.06
CCDC148Q8NFR7 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC148Q8NFR7 AC145285.6-201ENST00000604632 637 ntBASIC21.65■■□□□ 1.06
CCDC148Q8NFR7 AC068587.9-201ENST00000641814 219 ntBASIC21.65■■□□□ 1.06
CCDC148Q8NFR7 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC21.65■■□□□ 1.06
CCDC148Q8NFR7 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC148Q8NFR7 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC21.65■■□□□ 1.06
CCDC148Q8NFR7 HEIH-201ENST00000623091 1652 ntBASIC21.65■■□□□ 1.06
CCDC148Q8NFR7 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC148Q8NFR7 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC21.65■■□□□ 1.06
CCDC148Q8NFR7 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC148Q8NFR7 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC148Q8NFR7 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC148Q8NFR7 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC148Q8NFR7 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CCDC148Q8NFR7 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC148Q8NFR7 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
CCDC148Q8NFR7 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CCDC148Q8NFR7 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CCDC148Q8NFR7 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CCDC148Q8NFR7 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC21.64■■□□□ 1.06
CCDC148Q8NFR7 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
CCDC148Q8NFR7 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
CCDC148Q8NFR7 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CCDC148Q8NFR7 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC21.64■■□□□ 1.06
CCDC148Q8NFR7 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC21.64■■□□□ 1.06
CCDC148Q8NFR7 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
CCDC148Q8NFR7 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC21.64■■□□□ 1.06
CCDC148Q8NFR7 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC148Q8NFR7 AL023284.2-201ENST00000405850 579 ntBASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms