Protein–RNA interactions for Protein: Q8NF99

ZNF397, Zinc finger protein 397, humanhuman

Predicted RBP Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF397Q8NF99 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF397Q8NF99 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
ZNF397Q8NF99 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF397Q8NF99 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
ZNF397Q8NF99 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC20.81■□□□□ 0.92
ZNF397Q8NF99 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF397Q8NF99 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF397Q8NF99 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF397Q8NF99 AC067852.2-201ENST00000590513 2313 ntBASIC20.81■□□□□ 0.92
ZNF397Q8NF99 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF397Q8NF99 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF397Q8NF99 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF397Q8NF99 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.8■□□□□ 0.92
ZNF397Q8NF99 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF397Q8NF99 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
ZNF397Q8NF99 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF397Q8NF99 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF397Q8NF99 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.8■□□□□ 0.92
ZNF397Q8NF99 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF397Q8NF99 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF397Q8NF99 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF397Q8NF99 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF397Q8NF99 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF397Q8NF99 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.8■□□□□ 0.92
ZNF397Q8NF99 KRT18P16-201ENST00000510337 1294 ntBASIC20.8■□□□□ 0.92
ZNF397Q8NF99 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
ZNF397Q8NF99 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.8■□□□□ 0.92
ZNF397Q8NF99 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
ZNF397Q8NF99 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.8■□□□□ 0.92
ZNF397Q8NF99 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF397Q8NF99 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.8■□□□□ 0.92
ZNF397Q8NF99 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF397Q8NF99 FEM1AP3-201ENST00000403722 1741 ntBASIC20.8■□□□□ 0.92
ZNF397Q8NF99 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.8■□□□□ 0.92
ZNF397Q8NF99 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF397Q8NF99 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF397Q8NF99 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
ZNF397Q8NF99 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.8■□□□□ 0.92
ZNF397Q8NF99 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
ZNF397Q8NF99 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF397Q8NF99 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.79■□□□□ 0.92
ZNF397Q8NF99 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF397Q8NF99 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF397Q8NF99 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF397Q8NF99 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF397Q8NF99 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF397Q8NF99 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF397Q8NF99 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.79■□□□□ 0.92
ZNF397Q8NF99 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.79■□□□□ 0.92
ZNF397Q8NF99 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.79■□□□□ 0.92
ZNF397Q8NF99 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.79■□□□□ 0.92
ZNF397Q8NF99 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF397Q8NF99 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.79■□□□□ 0.92
ZNF397Q8NF99 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF397Q8NF99 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
ZNF397Q8NF99 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF397Q8NF99 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
ZNF397Q8NF99 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF397Q8NF99 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.79■□□□□ 0.92
ZNF397Q8NF99 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF397Q8NF99 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF397Q8NF99 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.79■□□□□ 0.92
ZNF397Q8NF99 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF397Q8NF99 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF397Q8NF99 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC20.78■□□□□ 0.92
ZNF397Q8NF99 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.78■□□□□ 0.92
ZNF397Q8NF99 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
ZNF397Q8NF99 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF397Q8NF99 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF397Q8NF99 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
ZNF397Q8NF99 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC20.78■□□□□ 0.92
ZNF397Q8NF99 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF397Q8NF99 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.78■□□□□ 0.92
ZNF397Q8NF99 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF397Q8NF99 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF397Q8NF99 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
ZNF397Q8NF99 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF397Q8NF99 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
ZNF397Q8NF99 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF397Q8NF99 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF397Q8NF99 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.78■□□□□ 0.92
ZNF397Q8NF99 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.78■□□□□ 0.92
ZNF397Q8NF99 CD99P1-205ENST00000527459 561 ntBASIC20.78■□□□□ 0.92
ZNF397Q8NF99 AP003097.1-201ENST00000530657 1135 ntBASIC20.78■□□□□ 0.92
ZNF397Q8NF99 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.78■□□□□ 0.92
ZNF397Q8NF99 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC20.78■□□□□ 0.92
ZNF397Q8NF99 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC20.78■□□□□ 0.92
ZNF397Q8NF99 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF397Q8NF99 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF397Q8NF99 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.78■□□□□ 0.92
ZNF397Q8NF99 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC20.78■□□□□ 0.92
ZNF397Q8NF99 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF397Q8NF99 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
ZNF397Q8NF99 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF397Q8NF99 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
ZNF397Q8NF99 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF397Q8NF99 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
ZNF397Q8NF99 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF397Q8NF99 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF397Q8NF99 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms