Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC21.31■■□□□ 1
RETREG2Q8NC44 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC21.31■■□□□ 1
RETREG2Q8NC44 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
RETREG2Q8NC44 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC21.31■■□□□ 1
RETREG2Q8NC44 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC21.31■■□□□ 1
RETREG2Q8NC44 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
RETREG2Q8NC44 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
RETREG2Q8NC44 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC21.3■■□□□ 1
RETREG2Q8NC44 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RETREG2Q8NC44 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC21.3■■□□□ 1
RETREG2Q8NC44 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC21.3■■□□□ 1
RETREG2Q8NC44 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RETREG2Q8NC44 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC21.3■■□□□ 1
RETREG2Q8NC44 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RETREG2Q8NC44 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC21.3■■□□□ 1
RETREG2Q8NC44 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC21.3■■□□□ 1
RETREG2Q8NC44 AL359075.1-203ENST00000462729 1002 ntBASIC21.3■■□□□ 1
RETREG2Q8NC44 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC21.3■■□□□ 1
RETREG2Q8NC44 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC21.3■■□□□ 1
RETREG2Q8NC44 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RETREG2Q8NC44 AC093458.2-201ENST00000623150 629 ntBASIC21.3■■□□□ 1
RETREG2Q8NC44 AL023973.1-201ENST00000624619 620 ntBASIC21.3■■□□□ 1
RETREG2Q8NC44 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
RETREG2Q8NC44 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC21.3■■□□□ 1
RETREG2Q8NC44 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RETREG2Q8NC44 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC21.3■■□□□ 1
RETREG2Q8NC44 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
RETREG2Q8NC44 AC093503.3-201ENST00000624917 2352 ntBASIC21.3■■□□□ 1
RETREG2Q8NC44 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RETREG2Q8NC44 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
RETREG2Q8NC44 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
RETREG2Q8NC44 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RETREG2Q8NC44 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC21.29■■□□□ 1
RETREG2Q8NC44 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC21.29■■□□□ 1
RETREG2Q8NC44 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
RETREG2Q8NC44 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC21.29■■□□□ 1
RETREG2Q8NC44 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RETREG2Q8NC44 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC21.29■■□□□ 1
RETREG2Q8NC44 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC21.29■■□□□ 1
RETREG2Q8NC44 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RETREG2Q8NC44 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
RETREG2Q8NC44 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
RETREG2Q8NC44 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC21.29■■□□□ 1
RETREG2Q8NC44 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC21.29■■□□□ 1
RETREG2Q8NC44 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RETREG2Q8NC44 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RETREG2Q8NC44 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC21.29■■□□□ 1
RETREG2Q8NC44 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC21.29■■□□□ 1
RETREG2Q8NC44 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC21.29■■□□□ 1
RETREG2Q8NC44 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC21.29■■□□□ 1
RETREG2Q8NC44 CKBP1-201ENST00000565489 1086 ntBASIC21.29■■□□□ 1
RETREG2Q8NC44 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RETREG2Q8NC44 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC21.29■■□□□ 1
RETREG2Q8NC44 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
RETREG2Q8NC44 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
RETREG2Q8NC44 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RETREG2Q8NC44 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RETREG2Q8NC44 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RETREG2Q8NC44 ZNF815P-204ENST00000434898 1737 ntBASIC21.29■■□□□ 1
RETREG2Q8NC44 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC21.29■■□□□ 1
RETREG2Q8NC44 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
RETREG2Q8NC44 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RETREG2Q8NC44 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RETREG2Q8NC44 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RETREG2Q8NC44 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC21.28■■□□□ 1
RETREG2Q8NC44 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
RETREG2Q8NC44 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC21.28■■□□□ 1
RETREG2Q8NC44 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
RETREG2Q8NC44 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
RETREG2Q8NC44 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC21.28■■□□□ 1
RETREG2Q8NC44 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC21.28■■□□□ 1
RETREG2Q8NC44 AC104417.2-201ENST00000562989 1793 ntBASIC21.28■■□□□ 1
RETREG2Q8NC44 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC21.28■■□□□ 1
RETREG2Q8NC44 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
RETREG2Q8NC44 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RETREG2Q8NC44 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC21.27■■□□□ 1
RETREG2Q8NC44 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC21.27■■□□□ 1
RETREG2Q8NC44 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RETREG2Q8NC44 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
RETREG2Q8NC44 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC21.27■■□□□ 1
RETREG2Q8NC44 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RETREG2Q8NC44 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
RETREG2Q8NC44 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC21.27■■□□□ 1
RETREG2Q8NC44 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RETREG2Q8NC44 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC21.27■■□□□ 1
RETREG2Q8NC44 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RETREG2Q8NC44 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC21.27■■□□□ 1
RETREG2Q8NC44 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC21.27■■□□□ 1
RETREG2Q8NC44 PRSS44-201ENST00000515154 1146 ntBASIC21.27■■□□□ 1
RETREG2Q8NC44 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC21.27■■□□□ 1
RETREG2Q8NC44 AL441883.1-201ENST00000566170 1045 ntBASIC21.27■■□□□ 1
RETREG2Q8NC44 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
RETREG2Q8NC44 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC21.27■■□□□ 1
RETREG2Q8NC44 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
RETREG2Q8NC44 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.27■■□□□ 1
RETREG2Q8NC44 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC21.27■■□□□ 1
RETREG2Q8NC44 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RETREG2Q8NC44 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RETREG2Q8NC44 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC21.27■■□□□ 1
RETREG2Q8NC44 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC21.27■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms