Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 BX664615.1-201ENST00000443558 458 ntBASIC19.74■□□□□ 0.75
CCDC33Q8N5R6 AC091390.4-202ENST00000476426 537 ntBASIC19.74■□□□□ 0.75
CCDC33Q8N5R6 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.74■□□□□ 0.75
CCDC33Q8N5R6 TNXA-203ENST00000507684 2038 ntBASIC19.74■□□□□ 0.75
CCDC33Q8N5R6 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC33Q8N5R6 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.74■□□□□ 0.75
CCDC33Q8N5R6 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC33Q8N5R6 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC33Q8N5R6 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC33Q8N5R6 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC33Q8N5R6 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC33Q8N5R6 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
CCDC33Q8N5R6 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC33Q8N5R6 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC33Q8N5R6 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC33Q8N5R6 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC33Q8N5R6 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC33Q8N5R6 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC33Q8N5R6 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CCDC33Q8N5R6 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC33Q8N5R6 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CCDC33Q8N5R6 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CCDC33Q8N5R6 AC116562.4-202ENST00000641738 218 ntBASIC19.73■□□□□ 0.75
CCDC33Q8N5R6 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC33Q8N5R6 FP475955.4-201ENST00000623131 1990 ntBASIC19.73■□□□□ 0.75
CCDC33Q8N5R6 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC33Q8N5R6 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC33Q8N5R6 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC33Q8N5R6 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC33Q8N5R6 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC33Q8N5R6 IRX1P1-201ENST00000438849 1838 ntBASIC19.72■□□□□ 0.75
CCDC33Q8N5R6 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC33Q8N5R6 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CCDC33Q8N5R6 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC33Q8N5R6 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC33Q8N5R6 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
CCDC33Q8N5R6 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC33Q8N5R6 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC33Q8N5R6 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC33Q8N5R6 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC33Q8N5R6 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.72■□□□□ 0.75
CCDC33Q8N5R6 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC33Q8N5R6 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC33Q8N5R6 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC33Q8N5R6 HMGA1P5-201ENST00000412453 271 ntBASIC19.72■□□□□ 0.75
CCDC33Q8N5R6 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC33Q8N5R6 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC33Q8N5R6 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC33Q8N5R6 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC33Q8N5R6 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
CCDC33Q8N5R6 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC33Q8N5R6 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.72■□□□□ 0.75
CCDC33Q8N5R6 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC33Q8N5R6 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC33Q8N5R6 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CCDC33Q8N5R6 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC33Q8N5R6 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CCDC33Q8N5R6 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CCDC33Q8N5R6 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC33Q8N5R6 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC33Q8N5R6 AC117947.1-201ENST00000427448 529 ntBASIC19.71■□□□□ 0.75
CCDC33Q8N5R6 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC33Q8N5R6 Z85996.1-201ENST00000494644 937 ntBASIC19.71■□□□□ 0.75
CCDC33Q8N5R6 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC33Q8N5R6 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.71■□□□□ 0.75
CCDC33Q8N5R6 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.71■□□□□ 0.75
CCDC33Q8N5R6 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC33Q8N5R6 AC139887.4-201ENST00000607877 719 ntBASIC19.71■□□□□ 0.75
CCDC33Q8N5R6 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CCDC33Q8N5R6 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC33Q8N5R6 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC33Q8N5R6 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC33Q8N5R6 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.71■□□□□ 0.75
CCDC33Q8N5R6 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC33Q8N5R6 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC33Q8N5R6 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CCDC33Q8N5R6 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC33Q8N5R6 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC33Q8N5R6 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC33Q8N5R6 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CCDC33Q8N5R6 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
CCDC33Q8N5R6 CCR12P-201ENST00000446203 998 ntBASIC19.7■□□□□ 0.74
CCDC33Q8N5R6 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.7■□□□□ 0.74
CCDC33Q8N5R6 AC022616.7-201ENST00000525383 220 ntBASIC19.7■□□□□ 0.74
CCDC33Q8N5R6 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC33Q8N5R6 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.7■□□□□ 0.74
CCDC33Q8N5R6 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
CCDC33Q8N5R6 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC33Q8N5R6 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.7■□□□□ 0.74
CCDC33Q8N5R6 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC33Q8N5R6 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC33Q8N5R6 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CCDC33Q8N5R6 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC33Q8N5R6 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC33Q8N5R6 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC33Q8N5R6 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC33Q8N5R6 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CCDC33Q8N5R6 KRT8P41-201ENST00000533985 1514 ntBASIC19.7■□□□□ 0.74
CCDC33Q8N5R6 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC33Q8N5R6 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms