Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ARHGEF39Q8N4T4 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.77■□□□□ 0.44
ARHGEF39Q8N4T4 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
ARHGEF39Q8N4T4 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.77■□□□□ 0.44
ARHGEF39Q8N4T4 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.77■□□□□ 0.44
ARHGEF39Q8N4T4 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ARHGEF39Q8N4T4 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ARHGEF39Q8N4T4 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ARHGEF39Q8N4T4 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
ARHGEF39Q8N4T4 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.76■□□□□ 0.43
ARHGEF39Q8N4T4 AC006333.2-201ENST00000607957 2099 ntBASIC17.76■□□□□ 0.43
ARHGEF39Q8N4T4 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
ARHGEF39Q8N4T4 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ARHGEF39Q8N4T4 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
ARHGEF39Q8N4T4 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ARHGEF39Q8N4T4 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.76■□□□□ 0.43
ARHGEF39Q8N4T4 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
ARHGEF39Q8N4T4 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
ARHGEF39Q8N4T4 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.76■□□□□ 0.43
ARHGEF39Q8N4T4 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ARHGEF39Q8N4T4 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
ARHGEF39Q8N4T4 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ARHGEF39Q8N4T4 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ARHGEF39Q8N4T4 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ARHGEF39Q8N4T4 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
ARHGEF39Q8N4T4 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.76■□□□□ 0.43
ARHGEF39Q8N4T4 AC063952.2-201ENST00000498792 1227 ntBASIC17.76■□□□□ 0.43
ARHGEF39Q8N4T4 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.76■□□□□ 0.43
ARHGEF39Q8N4T4 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ARHGEF39Q8N4T4 AL023973.1-201ENST00000624619 620 ntBASIC17.76■□□□□ 0.43
ARHGEF39Q8N4T4 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ARHGEF39Q8N4T4 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.76■□□□□ 0.43
ARHGEF39Q8N4T4 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.76■□□□□ 0.43
ARHGEF39Q8N4T4 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.76■□□□□ 0.43
ARHGEF39Q8N4T4 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ARHGEF39Q8N4T4 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ARHGEF39Q8N4T4 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
ARHGEF39Q8N4T4 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
ARHGEF39Q8N4T4 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.75■□□□□ 0.43
ARHGEF39Q8N4T4 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ARHGEF39Q8N4T4 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ARHGEF39Q8N4T4 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.75■□□□□ 0.43
ARHGEF39Q8N4T4 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.75■□□□□ 0.43
ARHGEF39Q8N4T4 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ARHGEF39Q8N4T4 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.75■□□□□ 0.43
ARHGEF39Q8N4T4 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.75■□□□□ 0.43
ARHGEF39Q8N4T4 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.75■□□□□ 0.43
ARHGEF39Q8N4T4 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.75■□□□□ 0.43
ARHGEF39Q8N4T4 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.75■□□□□ 0.43
ARHGEF39Q8N4T4 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.75■□□□□ 0.43
ARHGEF39Q8N4T4 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.75■□□□□ 0.43
ARHGEF39Q8N4T4 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.75■□□□□ 0.43
ARHGEF39Q8N4T4 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
ARHGEF39Q8N4T4 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ARHGEF39Q8N4T4 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ARHGEF39Q8N4T4 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ARHGEF39Q8N4T4 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ARHGEF39Q8N4T4 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.75■□□□□ 0.43
ARHGEF39Q8N4T4 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ARHGEF39Q8N4T4 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
ARHGEF39Q8N4T4 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ARHGEF39Q8N4T4 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.74■□□□□ 0.43
ARHGEF39Q8N4T4 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
ARHGEF39Q8N4T4 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ARHGEF39Q8N4T4 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ARHGEF39Q8N4T4 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ARHGEF39Q8N4T4 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ARHGEF39Q8N4T4 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
ARHGEF39Q8N4T4 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ARHGEF39Q8N4T4 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
ARHGEF39Q8N4T4 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ARHGEF39Q8N4T4 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ARHGEF39Q8N4T4 RNF152P1-201ENST00000397754 604 ntBASIC17.74■□□□□ 0.43
ARHGEF39Q8N4T4 AK4P3-201ENST00000418260 669 ntBASIC17.74■□□□□ 0.43
ARHGEF39Q8N4T4 TSPY5P-201ENST00000426936 936 ntBASIC17.74■□□□□ 0.43
ARHGEF39Q8N4T4 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ARHGEF39Q8N4T4 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.74■□□□□ 0.43
ARHGEF39Q8N4T4 AC010331.1-201ENST00000611423 582 ntBASIC17.74■□□□□ 0.43
ARHGEF39Q8N4T4 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
ARHGEF39Q8N4T4 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.74■□□□□ 0.43
ARHGEF39Q8N4T4 AL031432.5-201ENST00000641059 760 ntBASIC17.74■□□□□ 0.43
ARHGEF39Q8N4T4 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.74■□□□□ 0.43
ARHGEF39Q8N4T4 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ARHGEF39Q8N4T4 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.74■□□□□ 0.43
ARHGEF39Q8N4T4 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ARHGEF39Q8N4T4 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ARHGEF39Q8N4T4 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.73■□□□□ 0.43
ARHGEF39Q8N4T4 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
ARHGEF39Q8N4T4 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
ARHGEF39Q8N4T4 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
ARHGEF39Q8N4T4 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ARHGEF39Q8N4T4 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ARHGEF39Q8N4T4 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
ARHGEF39Q8N4T4 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.73■□□□□ 0.43
ARHGEF39Q8N4T4 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ARHGEF39Q8N4T4 FAM8A6P-201ENST00000407496 1135 ntBASIC17.73■□□□□ 0.43
ARHGEF39Q8N4T4 MIR1224-201ENST00000408193 85 ntBASIC17.73■□□□□ 0.43
ARHGEF39Q8N4T4 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.73■□□□□ 0.43
ARHGEF39Q8N4T4 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.73■□□□□ 0.43
ARHGEF39Q8N4T4 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms