Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RP1L1Q8IWN7 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RP1L1Q8IWN7 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
RP1L1Q8IWN7 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RP1L1Q8IWN7 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
RP1L1Q8IWN7 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.02■□□□□ 0.31
RP1L1Q8IWN7 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RP1L1Q8IWN7 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.01■□□□□ 0.31
RP1L1Q8IWN7 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RP1L1Q8IWN7 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.01■□□□□ 0.31
RP1L1Q8IWN7 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.01■□□□□ 0.31
RP1L1Q8IWN7 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RP1L1Q8IWN7 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RP1L1Q8IWN7 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RP1L1Q8IWN7 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RP1L1Q8IWN7 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RP1L1Q8IWN7 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RP1L1Q8IWN7 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
RP1L1Q8IWN7 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
RP1L1Q8IWN7 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
RP1L1Q8IWN7 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RP1L1Q8IWN7 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RP1L1Q8IWN7 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
RP1L1Q8IWN7 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.01■□□□□ 0.31
RP1L1Q8IWN7 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
RP1L1Q8IWN7 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RP1L1Q8IWN7 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RP1L1Q8IWN7 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
RP1L1Q8IWN7 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.01■□□□□ 0.31
RP1L1Q8IWN7 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
RP1L1Q8IWN7 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
RP1L1Q8IWN7 LINC01006-201ENST00000333319 2292 ntBASIC17.01■□□□□ 0.31
RP1L1Q8IWN7 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RP1L1Q8IWN7 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
RP1L1Q8IWN7 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RP1L1Q8IWN7 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RP1L1Q8IWN7 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.01■□□□□ 0.31
RP1L1Q8IWN7 RNF126P1-202ENST00000569893 925 ntBASIC17.01■□□□□ 0.31
RP1L1Q8IWN7 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
RP1L1Q8IWN7 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RP1L1Q8IWN7 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17■□□□□ 0.31
RP1L1Q8IWN7 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RP1L1Q8IWN7 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RP1L1Q8IWN7 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
RP1L1Q8IWN7 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RP1L1Q8IWN7 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17■□□□□ 0.31
RP1L1Q8IWN7 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17■□□□□ 0.31
RP1L1Q8IWN7 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
RP1L1Q8IWN7 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17■□□□□ 0.31
RP1L1Q8IWN7 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17■□□□□ 0.31
RP1L1Q8IWN7 NME4-212ENST00000621774 904 ntTSL 3 BASIC17■□□□□ 0.31
RP1L1Q8IWN7 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17■□□□□ 0.31
RP1L1Q8IWN7 AF228730.7-201ENST00000641842 219 ntBASIC17■□□□□ 0.31
RP1L1Q8IWN7 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17■□□□□ 0.31
RP1L1Q8IWN7 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RP1L1Q8IWN7 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17■□□□□ 0.31
RP1L1Q8IWN7 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
RP1L1Q8IWN7 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RP1L1Q8IWN7 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17■□□□□ 0.31
RP1L1Q8IWN7 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17■□□□□ 0.31
RP1L1Q8IWN7 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
RP1L1Q8IWN7 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17■□□□□ 0.31
RP1L1Q8IWN7 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RP1L1Q8IWN7 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC17■□□□□ 0.31
RP1L1Q8IWN7 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.99■□□□□ 0.31
RP1L1Q8IWN7 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.99■□□□□ 0.31
RP1L1Q8IWN7 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RP1L1Q8IWN7 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RP1L1Q8IWN7 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
RP1L1Q8IWN7 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RP1L1Q8IWN7 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RP1L1Q8IWN7 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
RP1L1Q8IWN7 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RP1L1Q8IWN7 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RP1L1Q8IWN7 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC16.99■□□□□ 0.31
RP1L1Q8IWN7 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RP1L1Q8IWN7 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RP1L1Q8IWN7 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RP1L1Q8IWN7 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC16.99■□□□□ 0.31
RP1L1Q8IWN7 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
RP1L1Q8IWN7 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
RP1L1Q8IWN7 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
RP1L1Q8IWN7 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.99■□□□□ 0.31
RP1L1Q8IWN7 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RP1L1Q8IWN7 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
RP1L1Q8IWN7 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.99■□□□□ 0.31
RP1L1Q8IWN7 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.99■□□□□ 0.31
RP1L1Q8IWN7 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.99■□□□□ 0.31
RP1L1Q8IWN7 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RP1L1Q8IWN7 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.99■□□□□ 0.31
RP1L1Q8IWN7 LINC01711-201ENST00000598340 967 ntBASIC16.99■□□□□ 0.31
RP1L1Q8IWN7 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
RP1L1Q8IWN7 GPAT2P1-201ENST00000444924 1672 ntBASIC16.99■□□□□ 0.31
RP1L1Q8IWN7 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RP1L1Q8IWN7 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RP1L1Q8IWN7 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
RP1L1Q8IWN7 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RP1L1Q8IWN7 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RP1L1Q8IWN7 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RP1L1Q8IWN7 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms