Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 KRT8P32-201ENST00000512863 1461 ntBASIC20.17■□□□□ 0.82
NPAS4Q8IUM7 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
NPAS4Q8IUM7 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NPAS4Q8IUM7 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
NPAS4Q8IUM7 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NPAS4Q8IUM7 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NPAS4Q8IUM7 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NPAS4Q8IUM7 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NPAS4Q8IUM7 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
NPAS4Q8IUM7 LINC01521-201ENST00000504184 1943 ntBASIC20.16■□□□□ 0.82
NPAS4Q8IUM7 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NPAS4Q8IUM7 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NPAS4Q8IUM7 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NPAS4Q8IUM7 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.16■□□□□ 0.82
NPAS4Q8IUM7 AC090616.6-201ENST00000582640 721 ntBASIC20.16■□□□□ 0.82
NPAS4Q8IUM7 AC005332.3-201ENST00000589904 676 ntBASIC20.16■□□□□ 0.82
NPAS4Q8IUM7 AL390719.2-201ENST00000606993 987 ntBASIC20.16■□□□□ 0.82
NPAS4Q8IUM7 AL732292.2-201ENST00000609649 430 ntBASIC20.16■□□□□ 0.82
NPAS4Q8IUM7 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
NPAS4Q8IUM7 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
NPAS4Q8IUM7 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
NPAS4Q8IUM7 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NPAS4Q8IUM7 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.16■□□□□ 0.82
NPAS4Q8IUM7 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NPAS4Q8IUM7 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NPAS4Q8IUM7 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NPAS4Q8IUM7 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
NPAS4Q8IUM7 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
NPAS4Q8IUM7 FEM1AP3-201ENST00000403722 1741 ntBASIC20.16■□□□□ 0.82
NPAS4Q8IUM7 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NPAS4Q8IUM7 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NPAS4Q8IUM7 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.15■□□□□ 0.82
NPAS4Q8IUM7 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NPAS4Q8IUM7 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NPAS4Q8IUM7 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.15■□□□□ 0.82
NPAS4Q8IUM7 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
NPAS4Q8IUM7 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NPAS4Q8IUM7 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.15■□□□□ 0.82
NPAS4Q8IUM7 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC20.15■□□□□ 0.82
NPAS4Q8IUM7 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.15■□□□□ 0.82
NPAS4Q8IUM7 AC091304.2-201ENST00000564639 760 ntBASIC20.15■□□□□ 0.82
NPAS4Q8IUM7 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.15■□□□□ 0.82
NPAS4Q8IUM7 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NPAS4Q8IUM7 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.15■□□□□ 0.82
NPAS4Q8IUM7 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NPAS4Q8IUM7 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.15■□□□□ 0.82
NPAS4Q8IUM7 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NPAS4Q8IUM7 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
NPAS4Q8IUM7 AC034236.2-201ENST00000606662 1610 ntBASIC20.15■□□□□ 0.82
NPAS4Q8IUM7 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NPAS4Q8IUM7 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.15■□□□□ 0.82
NPAS4Q8IUM7 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
NPAS4Q8IUM7 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.15■□□□□ 0.82
NPAS4Q8IUM7 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NPAS4Q8IUM7 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
NPAS4Q8IUM7 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.15■□□□□ 0.82
NPAS4Q8IUM7 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.15■□□□□ 0.82
NPAS4Q8IUM7 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
NPAS4Q8IUM7 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.14■□□□□ 0.82
NPAS4Q8IUM7 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
NPAS4Q8IUM7 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.14■□□□□ 0.82
NPAS4Q8IUM7 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NPAS4Q8IUM7 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.14■□□□□ 0.81
NPAS4Q8IUM7 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NPAS4Q8IUM7 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
NPAS4Q8IUM7 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NPAS4Q8IUM7 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NPAS4Q8IUM7 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.14■□□□□ 0.81
NPAS4Q8IUM7 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC20.14■□□□□ 0.81
NPAS4Q8IUM7 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NPAS4Q8IUM7 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NPAS4Q8IUM7 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
NPAS4Q8IUM7 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.14■□□□□ 0.81
NPAS4Q8IUM7 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC20.14■□□□□ 0.81
NPAS4Q8IUM7 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.14■□□□□ 0.81
NPAS4Q8IUM7 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NPAS4Q8IUM7 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.14■□□□□ 0.81
NPAS4Q8IUM7 LINC01711-201ENST00000598340 967 ntBASIC20.14■□□□□ 0.81
NPAS4Q8IUM7 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.14■□□□□ 0.81
NPAS4Q8IUM7 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.14■□□□□ 0.81
NPAS4Q8IUM7 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NPAS4Q8IUM7 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.13■□□□□ 0.81
NPAS4Q8IUM7 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.13■□□□□ 0.81
NPAS4Q8IUM7 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NPAS4Q8IUM7 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.13■□□□□ 0.81
NPAS4Q8IUM7 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NPAS4Q8IUM7 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NPAS4Q8IUM7 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NPAS4Q8IUM7 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NPAS4Q8IUM7 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NPAS4Q8IUM7 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.13■□□□□ 0.81
NPAS4Q8IUM7 EMBP1-201ENST00000458200 901 ntBASIC20.13■□□□□ 0.81
NPAS4Q8IUM7 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC20.13■□□□□ 0.81
NPAS4Q8IUM7 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
NPAS4Q8IUM7 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
NPAS4Q8IUM7 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NPAS4Q8IUM7 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NPAS4Q8IUM7 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NPAS4Q8IUM7 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NPAS4Q8IUM7 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms