Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LRRTM1Q86UE6 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LRRTM1Q86UE6 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRTM1Q86UE6 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.35■□□□□ 0.21
LRRTM1Q86UE6 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
LRRTM1Q86UE6 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.35■□□□□ 0.21
LRRTM1Q86UE6 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LRRTM1Q86UE6 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
LRRTM1Q86UE6 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRTM1Q86UE6 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRTM1Q86UE6 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRTM1Q86UE6 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.35■□□□□ 0.21
LRRTM1Q86UE6 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRTM1Q86UE6 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRTM1Q86UE6 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRTM1Q86UE6 AL499627.1-201ENST00000569373 2188 ntBASIC16.34■□□□□ 0.21
LRRTM1Q86UE6 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
LRRTM1Q86UE6 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRRTM1Q86UE6 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
LRRTM1Q86UE6 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRTM1Q86UE6 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.34■□□□□ 0.21
LRRTM1Q86UE6 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
LRRTM1Q86UE6 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
LRRTM1Q86UE6 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRTM1Q86UE6 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRTM1Q86UE6 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRTM1Q86UE6 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
LRRTM1Q86UE6 MIR663A-201ENST00000385250 93 ntBASIC16.34■□□□□ 0.21
LRRTM1Q86UE6 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC16.34■□□□□ 0.21
LRRTM1Q86UE6 BET1L-207ENST00000529614 560 ntTSL 5 BASIC16.34■□□□□ 0.21
LRRTM1Q86UE6 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC16.34■□□□□ 0.21
LRRTM1Q86UE6 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRTM1Q86UE6 HLA-B-256ENST00000639848 1089 ntBASIC16.34■□□□□ 0.21
LRRTM1Q86UE6 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
LRRTM1Q86UE6 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
LRRTM1Q86UE6 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
LRRTM1Q86UE6 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRRTM1Q86UE6 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
LRRTM1Q86UE6 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRTM1Q86UE6 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRTM1Q86UE6 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRTM1Q86UE6 MTMR9LP-203ENST00000426597 1545 ntBASIC16.34■□□□□ 0.21
LRRTM1Q86UE6 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRRTM1Q86UE6 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRRTM1Q86UE6 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LRRTM1Q86UE6 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
LRRTM1Q86UE6 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.33■□□□□ 0.21
LRRTM1Q86UE6 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LRRTM1Q86UE6 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LRRTM1Q86UE6 ESPNP-201ENST00000270691 2015 ntBASIC16.33■□□□□ 0.21
LRRTM1Q86UE6 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LRRTM1Q86UE6 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.21
LRRTM1Q86UE6 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRTM1Q86UE6 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRTM1Q86UE6 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.33■□□□□ 0.2
LRRTM1Q86UE6 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRTM1Q86UE6 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LRRTM1Q86UE6 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.33■□□□□ 0.2
LRRTM1Q86UE6 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
LRRTM1Q86UE6 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC16.33■□□□□ 0.2
LRRTM1Q86UE6 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC16.33■□□□□ 0.2
LRRTM1Q86UE6 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.33■□□□□ 0.2
LRRTM1Q86UE6 RGMA-211ENST00000557420 989 ntTSL 3 BASIC16.33■□□□□ 0.2
LRRTM1Q86UE6 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.33■□□□□ 0.2
LRRTM1Q86UE6 AL160286.2-201ENST00000567150 934 ntBASIC16.33■□□□□ 0.2
LRRTM1Q86UE6 RARRES2P6-201ENST00000567333 442 ntBASIC16.33■□□□□ 0.2
LRRTM1Q86UE6 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LRRTM1Q86UE6 ANKRD20A6P-201ENST00000618763 204 ntBASIC16.33■□□□□ 0.2
LRRTM1Q86UE6 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
LRRTM1Q86UE6 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LRRTM1Q86UE6 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRTM1Q86UE6 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRTM1Q86UE6 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
LRRTM1Q86UE6 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.33■□□□□ 0.2
LRRTM1Q86UE6 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRTM1Q86UE6 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
LRRTM1Q86UE6 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRTM1Q86UE6 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.33■□□□□ 0.2
LRRTM1Q86UE6 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
LRRTM1Q86UE6 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRTM1Q86UE6 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LRRTM1Q86UE6 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
LRRTM1Q86UE6 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRTM1Q86UE6 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRTM1Q86UE6 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRTM1Q86UE6 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRTM1Q86UE6 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRTM1Q86UE6 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRTM1Q86UE6 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LRRTM1Q86UE6 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRTM1Q86UE6 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LRRTM1Q86UE6 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRTM1Q86UE6 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LRRTM1Q86UE6 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRTM1Q86UE6 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRTM1Q86UE6 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRTM1Q86UE6 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC16.32■□□□□ 0.2
LRRTM1Q86UE6 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LRRTM1Q86UE6 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRTM1Q86UE6 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms