Protein–RNA interactions for Protein: Q7Z739

YTHDF3, YTH domain-containing family protein 3, humanhuman

Known RBP Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YTHDF3Q7Z739 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.67■□□□□ 0.58
YTHDF3Q7Z739 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
YTHDF3Q7Z739 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
YTHDF3Q7Z739 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
YTHDF3Q7Z739 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.67■□□□□ 0.58
YTHDF3Q7Z739 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
YTHDF3Q7Z739 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
YTHDF3Q7Z739 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
YTHDF3Q7Z739 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.67■□□□□ 0.58
YTHDF3Q7Z739 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.67■□□□□ 0.58
YTHDF3Q7Z739 RAP2CP1-201ENST00000605103 478 ntBASIC18.67■□□□□ 0.58
YTHDF3Q7Z739 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
YTHDF3Q7Z739 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.67■□□□□ 0.58
YTHDF3Q7Z739 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
YTHDF3Q7Z739 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
YTHDF3Q7Z739 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
YTHDF3Q7Z739 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
YTHDF3Q7Z739 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.67■□□□□ 0.58
YTHDF3Q7Z739 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
YTHDF3Q7Z739 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
YTHDF3Q7Z739 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
YTHDF3Q7Z739 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
YTHDF3Q7Z739 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
YTHDF3Q7Z739 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
YTHDF3Q7Z739 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
YTHDF3Q7Z739 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
YTHDF3Q7Z739 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
YTHDF3Q7Z739 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
YTHDF3Q7Z739 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
YTHDF3Q7Z739 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.66■□□□□ 0.58
YTHDF3Q7Z739 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
YTHDF3Q7Z739 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
YTHDF3Q7Z739 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
YTHDF3Q7Z739 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.66■□□□□ 0.58
YTHDF3Q7Z739 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.66■□□□□ 0.58
YTHDF3Q7Z739 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
YTHDF3Q7Z739 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
YTHDF3Q7Z739 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.66■□□□□ 0.58
YTHDF3Q7Z739 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.66■□□□□ 0.58
YTHDF3Q7Z739 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
YTHDF3Q7Z739 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.66■□□□□ 0.58
YTHDF3Q7Z739 AC026185.1-201ENST00000445748 174 ntBASIC18.66■□□□□ 0.58
YTHDF3Q7Z739 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.66■□□□□ 0.58
YTHDF3Q7Z739 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.66■□□□□ 0.58
YTHDF3Q7Z739 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.66■□□□□ 0.58
YTHDF3Q7Z739 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.66■□□□□ 0.58
YTHDF3Q7Z739 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
YTHDF3Q7Z739 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.66■□□□□ 0.58
YTHDF3Q7Z739 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.66■□□□□ 0.58
YTHDF3Q7Z739 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
YTHDF3Q7Z739 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
YTHDF3Q7Z739 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.66■□□□□ 0.58
YTHDF3Q7Z739 AL121761.2-201ENST00000598007 1648 ntBASIC18.66■□□□□ 0.58
YTHDF3Q7Z739 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
YTHDF3Q7Z739 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.66■□□□□ 0.58
YTHDF3Q7Z739 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
YTHDF3Q7Z739 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
YTHDF3Q7Z739 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.66■□□□□ 0.58
YTHDF3Q7Z739 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
YTHDF3Q7Z739 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
YTHDF3Q7Z739 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
YTHDF3Q7Z739 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
YTHDF3Q7Z739 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.65■□□□□ 0.58
YTHDF3Q7Z739 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.65■□□□□ 0.58
YTHDF3Q7Z739 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
YTHDF3Q7Z739 PP12613-201ENST00000424958 2230 ntBASIC18.65■□□□□ 0.58
YTHDF3Q7Z739 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
YTHDF3Q7Z739 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
YTHDF3Q7Z739 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.65■□□□□ 0.58
YTHDF3Q7Z739 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
YTHDF3Q7Z739 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.65■□□□□ 0.58
YTHDF3Q7Z739 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.65■□□□□ 0.58
YTHDF3Q7Z739 KRT18P61-201ENST00000585825 1298 ntBASIC18.65■□□□□ 0.58
YTHDF3Q7Z739 BID-214ENST00000617586 542 ntTSL 5 BASIC18.65■□□□□ 0.58
YTHDF3Q7Z739 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
YTHDF3Q7Z739 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
YTHDF3Q7Z739 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
YTHDF3Q7Z739 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.65■□□□□ 0.58
YTHDF3Q7Z739 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
YTHDF3Q7Z739 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
YTHDF3Q7Z739 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
YTHDF3Q7Z739 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
YTHDF3Q7Z739 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
YTHDF3Q7Z739 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
YTHDF3Q7Z739 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
YTHDF3Q7Z739 AL356309.3-201ENST00000624132 1934 ntBASIC18.64■□□□□ 0.58
YTHDF3Q7Z739 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.64■□□□□ 0.58
YTHDF3Q7Z739 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
YTHDF3Q7Z739 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
YTHDF3Q7Z739 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.64■□□□□ 0.57
YTHDF3Q7Z739 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.64■□□□□ 0.57
YTHDF3Q7Z739 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
YTHDF3Q7Z739 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
YTHDF3Q7Z739 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
YTHDF3Q7Z739 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.64■□□□□ 0.57
YTHDF3Q7Z739 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
YTHDF3Q7Z739 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
YTHDF3Q7Z739 AC006970.2-201ENST00000450065 779 ntBASIC18.64■□□□□ 0.57
YTHDF3Q7Z739 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.64■□□□□ 0.57
YTHDF3Q7Z739 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms