Protein–RNA interactions for Protein: Q6W3E5

GDPD4, Glycerophosphodiester phosphodiesterase domain-containing protein 4, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD4Q6W3E5 AL445228.2-201ENST00000605589 952 ntBASIC18.88■□□□□ 0.61
GDPD4Q6W3E5 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
GDPD4Q6W3E5 AC068587.9-201ENST00000641814 219 ntBASIC18.88■□□□□ 0.61
GDPD4Q6W3E5 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GDPD4Q6W3E5 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.88■□□□□ 0.61
GDPD4Q6W3E5 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
GDPD4Q6W3E5 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
GDPD4Q6W3E5 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.88■□□□□ 0.61
GDPD4Q6W3E5 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
GDPD4Q6W3E5 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.88■□□□□ 0.61
GDPD4Q6W3E5 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
GDPD4Q6W3E5 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GDPD4Q6W3E5 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GDPD4Q6W3E5 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
GDPD4Q6W3E5 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
GDPD4Q6W3E5 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
GDPD4Q6W3E5 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
GDPD4Q6W3E5 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GDPD4Q6W3E5 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
GDPD4Q6W3E5 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
GDPD4Q6W3E5 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GDPD4Q6W3E5 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GDPD4Q6W3E5 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
GDPD4Q6W3E5 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GDPD4Q6W3E5 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GDPD4Q6W3E5 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GDPD4Q6W3E5 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.87■□□□□ 0.61
GDPD4Q6W3E5 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
GDPD4Q6W3E5 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GDPD4Q6W3E5 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
GDPD4Q6W3E5 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.87■□□□□ 0.61
GDPD4Q6W3E5 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.87■□□□□ 0.61
GDPD4Q6W3E5 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.87■□□□□ 0.61
GDPD4Q6W3E5 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.87■□□□□ 0.61
GDPD4Q6W3E5 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
GDPD4Q6W3E5 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
GDPD4Q6W3E5 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.87■□□□□ 0.61
GDPD4Q6W3E5 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GDPD4Q6W3E5 NTF6B-201ENST00000591913 560 ntBASIC18.87■□□□□ 0.61
GDPD4Q6W3E5 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
GDPD4Q6W3E5 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.87■□□□□ 0.61
GDPD4Q6W3E5 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.87■□□□□ 0.61
GDPD4Q6W3E5 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GDPD4Q6W3E5 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GDPD4Q6W3E5 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
GDPD4Q6W3E5 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GDPD4Q6W3E5 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
GDPD4Q6W3E5 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GDPD4Q6W3E5 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GDPD4Q6W3E5 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
GDPD4Q6W3E5 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GDPD4Q6W3E5 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.86■□□□□ 0.61
GDPD4Q6W3E5 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GDPD4Q6W3E5 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GDPD4Q6W3E5 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GDPD4Q6W3E5 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GDPD4Q6W3E5 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GDPD4Q6W3E5 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GDPD4Q6W3E5 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
GDPD4Q6W3E5 MIR564-202ENST00000385049 94 ntBASIC18.86■□□□□ 0.61
GDPD4Q6W3E5 FAM8A6P-201ENST00000407496 1135 ntBASIC18.86■□□□□ 0.61
GDPD4Q6W3E5 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.86■□□□□ 0.61
GDPD4Q6W3E5 GCSHP2-201ENST00000560971 527 ntBASIC18.86■□□□□ 0.61
GDPD4Q6W3E5 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.86■□□□□ 0.61
GDPD4Q6W3E5 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.86■□□□□ 0.61
GDPD4Q6W3E5 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
GDPD4Q6W3E5 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.86■□□□□ 0.61
GDPD4Q6W3E5 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GDPD4Q6W3E5 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.86■□□□□ 0.61
GDPD4Q6W3E5 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.86■□□□□ 0.61
GDPD4Q6W3E5 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GDPD4Q6W3E5 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GDPD4Q6W3E5 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
GDPD4Q6W3E5 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
GDPD4Q6W3E5 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
GDPD4Q6W3E5 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
GDPD4Q6W3E5 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GDPD4Q6W3E5 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GDPD4Q6W3E5 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.85■□□□□ 0.61
GDPD4Q6W3E5 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GDPD4Q6W3E5 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.85■□□□□ 0.61
GDPD4Q6W3E5 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
GDPD4Q6W3E5 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
GDPD4Q6W3E5 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
GDPD4Q6W3E5 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GDPD4Q6W3E5 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GDPD4Q6W3E5 ARMC10P1-201ENST00000313754 855 ntBASIC18.85■□□□□ 0.61
GDPD4Q6W3E5 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GDPD4Q6W3E5 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.85■□□□□ 0.61
GDPD4Q6W3E5 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
GDPD4Q6W3E5 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.85■□□□□ 0.61
GDPD4Q6W3E5 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.85■□□□□ 0.61
GDPD4Q6W3E5 HOMER2P1-201ENST00000455653 964 ntBASIC18.85■□□□□ 0.61
GDPD4Q6W3E5 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.85■□□□□ 0.61
GDPD4Q6W3E5 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.85■□□□□ 0.61
GDPD4Q6W3E5 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.85■□□□□ 0.61
GDPD4Q6W3E5 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
GDPD4Q6W3E5 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
GDPD4Q6W3E5 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GDPD4Q6W3E5 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms