Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM53Q6P2H8 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM53Q6P2H8 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM53Q6P2H8 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
TMEM53Q6P2H8 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.22■□□□□ 0.35
TMEM53Q6P2H8 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TMEM53Q6P2H8 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM53Q6P2H8 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
TMEM53Q6P2H8 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM53Q6P2H8 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.22■□□□□ 0.35
TMEM53Q6P2H8 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
TMEM53Q6P2H8 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.22■□□□□ 0.35
TMEM53Q6P2H8 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM53Q6P2H8 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM53Q6P2H8 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM53Q6P2H8 TFP1-202ENST00000475455 1573 ntBASIC17.22■□□□□ 0.35
TMEM53Q6P2H8 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM53Q6P2H8 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM53Q6P2H8 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.22■□□□□ 0.35
TMEM53Q6P2H8 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM53Q6P2H8 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM53Q6P2H8 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM53Q6P2H8 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM53Q6P2H8 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.22■□□□□ 0.35
TMEM53Q6P2H8 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM53Q6P2H8 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.21■□□□□ 0.35
TMEM53Q6P2H8 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
TMEM53Q6P2H8 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.21■□□□□ 0.35
TMEM53Q6P2H8 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM53Q6P2H8 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM53Q6P2H8 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TMEM53Q6P2H8 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM53Q6P2H8 BCL2-203ENST00000589955 5011 ntBASIC17.21■□□□□ 0.35
TMEM53Q6P2H8 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM53Q6P2H8 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
TMEM53Q6P2H8 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM53Q6P2H8 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM53Q6P2H8 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM53Q6P2H8 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM53Q6P2H8 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM53Q6P2H8 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM53Q6P2H8 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.21■□□□□ 0.35
TMEM53Q6P2H8 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.21■□□□□ 0.35
TMEM53Q6P2H8 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM53Q6P2H8 POU5F1P3-201ENST00000428824 1078 ntBASIC17.21■□□□□ 0.35
TMEM53Q6P2H8 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.21■□□□□ 0.35
TMEM53Q6P2H8 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.21■□□□□ 0.35
TMEM53Q6P2H8 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.21■□□□□ 0.35
TMEM53Q6P2H8 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM53Q6P2H8 AC006058.3-201ENST00000606217 1069 ntBASIC17.21■□□□□ 0.35
TMEM53Q6P2H8 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM53Q6P2H8 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM53Q6P2H8 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM53Q6P2H8 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.21■□□□□ 0.35
TMEM53Q6P2H8 AC067852.2-201ENST00000590513 2313 ntBASIC17.21■□□□□ 0.35
TMEM53Q6P2H8 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM53Q6P2H8 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM53Q6P2H8 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM53Q6P2H8 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM53Q6P2H8 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM53Q6P2H8 AC068418.2-201ENST00000577309 3703 ntBASIC17.21■□□□□ 0.35
TMEM53Q6P2H8 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TMEM53Q6P2H8 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
TMEM53Q6P2H8 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
TMEM53Q6P2H8 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM53Q6P2H8 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM53Q6P2H8 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM53Q6P2H8 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM53Q6P2H8 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM53Q6P2H8 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.2■□□□□ 0.34
TMEM53Q6P2H8 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM53Q6P2H8 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM53Q6P2H8 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM53Q6P2H8 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM53Q6P2H8 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM53Q6P2H8 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM53Q6P2H8 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM53Q6P2H8 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TMEM53Q6P2H8 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.2■□□□□ 0.34
TMEM53Q6P2H8 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
TMEM53Q6P2H8 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TMEM53Q6P2H8 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.2■□□□□ 0.34
TMEM53Q6P2H8 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM53Q6P2H8 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM53Q6P2H8 MIR4651-201ENST00000582622 73 ntBASIC17.2■□□□□ 0.34
TMEM53Q6P2H8 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM53Q6P2H8 AC069544.1-201ENST00000609399 999 ntBASIC17.2■□□□□ 0.34
TMEM53Q6P2H8 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.2■□□□□ 0.34
TMEM53Q6P2H8 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TMEM53Q6P2H8 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.2■□□□□ 0.34
TMEM53Q6P2H8 AP006587.1-201ENST00000534129 1502 ntBASIC17.2■□□□□ 0.34
TMEM53Q6P2H8 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
TMEM53Q6P2H8 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.2■□□□□ 0.34
TMEM53Q6P2H8 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM53Q6P2H8 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.2■□□□□ 0.34
TMEM53Q6P2H8 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM53Q6P2H8 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM53Q6P2H8 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.19■□□□□ 0.34
TMEM53Q6P2H8 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.19■□□□□ 0.34
TMEM53Q6P2H8 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms