Protein–RNA interactions for Protein: Q6A163

KRT39, Keratin, type I cytoskeletal 39, humanhuman

Predictions only

Length 491 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39Q6A163 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRT39Q6A163 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRT39Q6A163 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRT39Q6A163 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
KRT39Q6A163 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRT39Q6A163 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRT39Q6A163 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRT39Q6A163 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.32■□□□□ 0.84
KRT39Q6A163 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
KRT39Q6A163 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.32■□□□□ 0.84
KRT39Q6A163 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRT39Q6A163 ANO7L1-203ENST00000602586 1720 ntBASIC20.32■□□□□ 0.84
KRT39Q6A163 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
KRT39Q6A163 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
KRT39Q6A163 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRT39Q6A163 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.31■□□□□ 0.84
KRT39Q6A163 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.31■□□□□ 0.84
KRT39Q6A163 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
KRT39Q6A163 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRT39Q6A163 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRT39Q6A163 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
KRT39Q6A163 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
KRT39Q6A163 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRT39Q6A163 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.31■□□□□ 0.84
KRT39Q6A163 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRT39Q6A163 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRT39Q6A163 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
KRT39Q6A163 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.31■□□□□ 0.84
KRT39Q6A163 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.31■□□□□ 0.84
KRT39Q6A163 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
KRT39Q6A163 AL023803.3-201ENST00000615559 522 ntBASIC20.31■□□□□ 0.84
KRT39Q6A163 AL109659.2-201ENST00000606809 1674 ntBASIC20.31■□□□□ 0.84
KRT39Q6A163 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRT39Q6A163 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
KRT39Q6A163 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.31■□□□□ 0.84
KRT39Q6A163 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRT39Q6A163 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KRT39Q6A163 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT39Q6A163 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
KRT39Q6A163 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT39Q6A163 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT39Q6A163 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.3■□□□□ 0.84
KRT39Q6A163 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT39Q6A163 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT39Q6A163 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.3■□□□□ 0.84
KRT39Q6A163 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT39Q6A163 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.3■□□□□ 0.84
KRT39Q6A163 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT39Q6A163 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.3■□□□□ 0.84
KRT39Q6A163 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.3■□□□□ 0.84
KRT39Q6A163 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.3■□□□□ 0.84
KRT39Q6A163 C2orf69P3-201ENST00000565542 1120 ntBASIC20.3■□□□□ 0.84
KRT39Q6A163 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.3■□□□□ 0.84
KRT39Q6A163 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT39Q6A163 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT39Q6A163 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT39Q6A163 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT39Q6A163 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.3■□□□□ 0.84
KRT39Q6A163 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT39Q6A163 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
KRT39Q6A163 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.3■□□□□ 0.84
KRT39Q6A163 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KRT39Q6A163 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
KRT39Q6A163 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KRT39Q6A163 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT39Q6A163 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
KRT39Q6A163 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
KRT39Q6A163 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.29■□□□□ 0.84
KRT39Q6A163 MMP23A-201ENST00000234610 1017 ntBASIC20.29■□□□□ 0.84
KRT39Q6A163 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT39Q6A163 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT39Q6A163 AL023284.2-201ENST00000405850 579 ntBASIC20.29■□□□□ 0.84
KRT39Q6A163 TSPY17P-201ENST00000450329 467 ntBASIC20.29■□□□□ 0.84
KRT39Q6A163 AL353719.1-201ENST00000566847 864 ntBASIC20.29■□□□□ 0.84
KRT39Q6A163 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT39Q6A163 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.29■□□□□ 0.84
KRT39Q6A163 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT39Q6A163 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KRT39Q6A163 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT39Q6A163 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT39Q6A163 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
KRT39Q6A163 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT39Q6A163 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.29■□□□□ 0.84
KRT39Q6A163 GPAT2P1-201ENST00000444924 1672 ntBASIC20.29■□□□□ 0.84
KRT39Q6A163 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.29■□□□□ 0.84
KRT39Q6A163 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT39Q6A163 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.28■□□□□ 0.84
KRT39Q6A163 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.28■□□□□ 0.84
KRT39Q6A163 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
KRT39Q6A163 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.28■□□□□ 0.84
KRT39Q6A163 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.28■□□□□ 0.84
KRT39Q6A163 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.28■□□□□ 0.84
KRT39Q6A163 CCR12P-201ENST00000446203 998 ntBASIC20.28■□□□□ 0.84
KRT39Q6A163 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
KRT39Q6A163 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.28■□□□□ 0.84
KRT39Q6A163 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.28■□□□□ 0.84
KRT39Q6A163 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
KRT39Q6A163 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
KRT39Q6A163 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT39Q6A163 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms