Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNF43Q68DV7 CKBP1-201ENST00000565489 1086 ntBASIC19.73■□□□□ 0.75
RNF43Q68DV7 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.73■□□□□ 0.75
RNF43Q68DV7 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.73■□□□□ 0.75
RNF43Q68DV7 AL023803.3-201ENST00000615559 522 ntBASIC19.73■□□□□ 0.75
RNF43Q68DV7 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
RNF43Q68DV7 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNF43Q68DV7 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNF43Q68DV7 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF43Q68DV7 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.73■□□□□ 0.75
RNF43Q68DV7 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF43Q68DV7 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
RNF43Q68DV7 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
RNF43Q68DV7 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
RNF43Q68DV7 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF43Q68DV7 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.72■□□□□ 0.75
RNF43Q68DV7 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
RNF43Q68DV7 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
RNF43Q68DV7 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.72■□□□□ 0.75
RNF43Q68DV7 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.72■□□□□ 0.75
RNF43Q68DV7 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.72■□□□□ 0.75
RNF43Q68DV7 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.72■□□□□ 0.75
RNF43Q68DV7 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
RNF43Q68DV7 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.72■□□□□ 0.75
RNF43Q68DV7 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.72■□□□□ 0.75
RNF43Q68DV7 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.72■□□□□ 0.75
RNF43Q68DV7 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.72■□□□□ 0.75
RNF43Q68DV7 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RNF43Q68DV7 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RNF43Q68DV7 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.72■□□□□ 0.75
RNF43Q68DV7 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RNF43Q68DV7 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.72■□□□□ 0.75
RNF43Q68DV7 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.72■□□□□ 0.75
RNF43Q68DV7 FAM87A-204ENST00000613235 858 ntBASIC19.72■□□□□ 0.75
RNF43Q68DV7 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.72■□□□□ 0.75
RNF43Q68DV7 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RNF43Q68DV7 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.72■□□□□ 0.75
RNF43Q68DV7 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.72■□□□□ 0.75
RNF43Q68DV7 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
RNF43Q68DV7 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF43Q68DV7 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RNF43Q68DV7 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF43Q68DV7 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF43Q68DV7 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.72■□□□□ 0.75
RNF43Q68DV7 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
RNF43Q68DV7 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.71■□□□□ 0.75
RNF43Q68DV7 AL032819.2-201ENST00000624543 2162 ntBASIC19.71■□□□□ 0.75
RNF43Q68DV7 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
RNF43Q68DV7 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF43Q68DV7 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.71■□□□□ 0.75
RNF43Q68DV7 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.71■□□□□ 0.75
RNF43Q68DV7 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RNF43Q68DV7 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
RNF43Q68DV7 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF43Q68DV7 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF43Q68DV7 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.71■□□□□ 0.75
RNF43Q68DV7 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.71■□□□□ 0.75
RNF43Q68DV7 SLC25A1P2-201ENST00000430693 912 ntBASIC19.71■□□□□ 0.75
RNF43Q68DV7 CA15P1-201ENST00000481698 905 ntBASIC19.71■□□□□ 0.75
RNF43Q68DV7 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.71■□□□□ 0.75
RNF43Q68DV7 AC010203.1-204ENST00000548782 407 ntBASIC19.71■□□□□ 0.75
RNF43Q68DV7 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.71■□□□□ 0.75
RNF43Q68DV7 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.71■□□□□ 0.75
RNF43Q68DV7 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RNF43Q68DV7 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF43Q68DV7 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF43Q68DV7 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF43Q68DV7 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF43Q68DV7 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF43Q68DV7 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF43Q68DV7 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
RNF43Q68DV7 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RNF43Q68DV7 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF43Q68DV7 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF43Q68DV7 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF43Q68DV7 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.7■□□□□ 0.74
RNF43Q68DV7 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
RNF43Q68DV7 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
RNF43Q68DV7 KRT8P11-201ENST00000409686 1436 ntBASIC19.7■□□□□ 0.74
RNF43Q68DV7 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RNF43Q68DV7 PRSS44-201ENST00000515154 1146 ntBASIC19.7■□□□□ 0.74
RNF43Q68DV7 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.7■□□□□ 0.74
RNF43Q68DV7 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF43Q68DV7 AC091076.1-201ENST00000610741 619 ntBASIC19.7■□□□□ 0.74
RNF43Q68DV7 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
RNF43Q68DV7 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RNF43Q68DV7 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF43Q68DV7 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RNF43Q68DV7 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.7■□□□□ 0.74
RNF43Q68DV7 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF43Q68DV7 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF43Q68DV7 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RNF43Q68DV7 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF43Q68DV7 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF43Q68DV7 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RNF43Q68DV7 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF43Q68DV7 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.69■□□□□ 0.74
RNF43Q68DV7 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
RNF43Q68DV7 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF43Q68DV7 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms