Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ATPAF1Q5TC12 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
ATPAF1Q5TC12 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
ATPAF1Q5TC12 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ATPAF1Q5TC12 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.34■□□□□ 0.21
ATPAF1Q5TC12 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ATPAF1Q5TC12 Z98044.1-201ENST00000632503 1764 ntBASIC16.34■□□□□ 0.21
ATPAF1Q5TC12 TUBB8P6-201ENST00000436895 1288 ntBASIC16.34■□□□□ 0.21
ATPAF1Q5TC12 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ATPAF1Q5TC12 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ATPAF1Q5TC12 KRT16P5-201ENST00000455284 522 ntBASIC16.34■□□□□ 0.21
ATPAF1Q5TC12 AL359736.2-201ENST00000621992 437 ntBASIC16.34■□□□□ 0.21
ATPAF1Q5TC12 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ATPAF1Q5TC12 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ATPAF1Q5TC12 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ATPAF1Q5TC12 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.34■□□□□ 0.21
ATPAF1Q5TC12 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ATPAF1Q5TC12 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ATPAF1Q5TC12 AC068880.1-201ENST00000507289 2297 ntBASIC16.34■□□□□ 0.21
ATPAF1Q5TC12 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ATPAF1Q5TC12 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
ATPAF1Q5TC12 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
ATPAF1Q5TC12 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ATPAF1Q5TC12 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ATPAF1Q5TC12 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ATPAF1Q5TC12 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
ATPAF1Q5TC12 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
ATPAF1Q5TC12 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ATPAF1Q5TC12 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.33■□□□□ 0.21
ATPAF1Q5TC12 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ATPAF1Q5TC12 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
ATPAF1Q5TC12 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.33■□□□□ 0.2
ATPAF1Q5TC12 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.33■□□□□ 0.2
ATPAF1Q5TC12 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ATPAF1Q5TC12 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
ATPAF1Q5TC12 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
ATPAF1Q5TC12 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
ATPAF1Q5TC12 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.33■□□□□ 0.2
ATPAF1Q5TC12 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
ATPAF1Q5TC12 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
ATPAF1Q5TC12 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
ATPAF1Q5TC12 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATPAF1Q5TC12 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
ATPAF1Q5TC12 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
ATPAF1Q5TC12 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
ATPAF1Q5TC12 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ATPAF1Q5TC12 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.33■□□□□ 0.2
ATPAF1Q5TC12 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.33■□□□□ 0.2
ATPAF1Q5TC12 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATPAF1Q5TC12 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
ATPAF1Q5TC12 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATPAF1Q5TC12 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATPAF1Q5TC12 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.33■□□□□ 0.2
ATPAF1Q5TC12 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.33■□□□□ 0.2
ATPAF1Q5TC12 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.33■□□□□ 0.2
ATPAF1Q5TC12 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATPAF1Q5TC12 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.32■□□□□ 0.2
ATPAF1Q5TC12 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATPAF1Q5TC12 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC16.32■□□□□ 0.2
ATPAF1Q5TC12 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATPAF1Q5TC12 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATPAF1Q5TC12 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATPAF1Q5TC12 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ATPAF1Q5TC12 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
ATPAF1Q5TC12 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
ATPAF1Q5TC12 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ATPAF1Q5TC12 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
ATPAF1Q5TC12 GCSHP5-201ENST00000443090 522 ntBASIC16.32■□□□□ 0.2
ATPAF1Q5TC12 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC16.32■□□□□ 0.2
ATPAF1Q5TC12 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATPAF1Q5TC12 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATPAF1Q5TC12 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC16.32■□□□□ 0.2
ATPAF1Q5TC12 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
ATPAF1Q5TC12 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.32■□□□□ 0.2
ATPAF1Q5TC12 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC16.32■□□□□ 0.2
ATPAF1Q5TC12 AC142381.4-202ENST00000563973 229 ntBASIC16.32■□□□□ 0.2
ATPAF1Q5TC12 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.32■□□□□ 0.2
ATPAF1Q5TC12 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.32■□□□□ 0.2
ATPAF1Q5TC12 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATPAF1Q5TC12 FP475955.4-201ENST00000623131 1990 ntBASIC16.32■□□□□ 0.2
ATPAF1Q5TC12 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ATPAF1Q5TC12 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATPAF1Q5TC12 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATPAF1Q5TC12 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.31■□□□□ 0.2
ATPAF1Q5TC12 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATPAF1Q5TC12 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATPAF1Q5TC12 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.31■□□□□ 0.2
ATPAF1Q5TC12 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATPAF1Q5TC12 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATPAF1Q5TC12 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATPAF1Q5TC12 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.31■□□□□ 0.2
ATPAF1Q5TC12 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATPAF1Q5TC12 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATPAF1Q5TC12 KRT8P8-201ENST00000434750 1448 ntBASIC16.31■□□□□ 0.2
ATPAF1Q5TC12 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATPAF1Q5TC12 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.31■□□□□ 0.2
ATPAF1Q5TC12 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATPAF1Q5TC12 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATPAF1Q5TC12 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATPAF1Q5TC12 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms