Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ALFQ53S48 FAM210CP-201ENST00000445714 574 ntBASIC19.34■□□□□ 0.69
ALFQ53S48 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.34■□□□□ 0.69
ALFQ53S48 CR769767.2-201ENST00000622735 460 ntBASIC19.34■□□□□ 0.69
ALFQ53S48 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ALFQ53S48 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ALFQ53S48 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
ALFQ53S48 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.34■□□□□ 0.69
ALFQ53S48 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ALFQ53S48 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ALFQ53S48 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ALFQ53S48 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ALFQ53S48 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ALFQ53S48 AC008556.1-201ENST00000610908 2040 ntBASIC19.34■□□□□ 0.69
ALFQ53S48 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ALFQ53S48 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.34■□□□□ 0.69
ALFQ53S48 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.33■□□□□ 0.69
ALFQ53S48 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.33■□□□□ 0.69
ALFQ53S48 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ALFQ53S48 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
ALFQ53S48 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ALFQ53S48 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
ALFQ53S48 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ALFQ53S48 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
ALFQ53S48 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ALFQ53S48 LIN28AP1-201ENST00000429574 405 ntBASIC19.33■□□□□ 0.68
ALFQ53S48 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.33■□□□□ 0.68
ALFQ53S48 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.33■□□□□ 0.68
ALFQ53S48 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ALFQ53S48 AC092865.7-201ENST00000641832 219 ntBASIC19.33■□□□□ 0.68
ALFQ53S48 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ALFQ53S48 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.33■□□□□ 0.68
ALFQ53S48 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
ALFQ53S48 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ALFQ53S48 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ALFQ53S48 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ALFQ53S48 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.33■□□□□ 0.68
ALFQ53S48 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.33■□□□□ 0.68
ALFQ53S48 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.33■□□□□ 0.68
ALFQ53S48 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ALFQ53S48 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ALFQ53S48 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
ALFQ53S48 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ALFQ53S48 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.33■□□□□ 0.68
ALFQ53S48 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ALFQ53S48 AC006333.2-201ENST00000607957 2099 ntBASIC19.32■□□□□ 0.68
ALFQ53S48 AC036111.1-201ENST00000533973 1582 ntBASIC19.32■□□□□ 0.68
ALFQ53S48 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.32■□□□□ 0.68
ALFQ53S48 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ALFQ53S48 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ALFQ53S48 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
ALFQ53S48 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
ALFQ53S48 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.32■□□□□ 0.68
ALFQ53S48 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ALFQ53S48 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ALFQ53S48 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.32■□□□□ 0.68
ALFQ53S48 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.32■□□□□ 0.68
ALFQ53S48 MCCD1P1-208ENST00000445732 328 ntBASIC19.32■□□□□ 0.68
ALFQ53S48 ATP5G1P1-201ENST00000448724 379 ntBASIC19.32■□□□□ 0.68
ALFQ53S48 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.32■□□□□ 0.68
ALFQ53S48 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.32■□□□□ 0.68
ALFQ53S48 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ALFQ53S48 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.32■□□□□ 0.68
ALFQ53S48 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
ALFQ53S48 AC068587.9-201ENST00000641814 219 ntBASIC19.32■□□□□ 0.68
ALFQ53S48 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.32■□□□□ 0.68
ALFQ53S48 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.32■□□□□ 0.68
ALFQ53S48 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ALFQ53S48 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ALFQ53S48 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ALFQ53S48 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ALFQ53S48 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
ALFQ53S48 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ALFQ53S48 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
ALFQ53S48 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.31■□□□□ 0.68
ALFQ53S48 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
ALFQ53S48 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
ALFQ53S48 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ALFQ53S48 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
ALFQ53S48 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ALFQ53S48 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ALFQ53S48 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
ALFQ53S48 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ALFQ53S48 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.31■□□□□ 0.68
ALFQ53S48 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
ALFQ53S48 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ALFQ53S48 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.31■□□□□ 0.68
ALFQ53S48 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.31■□□□□ 0.68
ALFQ53S48 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
ALFQ53S48 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.31■□□□□ 0.68
ALFQ53S48 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.31■□□□□ 0.68
ALFQ53S48 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ALFQ53S48 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.31■□□□□ 0.68
ALFQ53S48 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ALFQ53S48 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
ALFQ53S48 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
ALFQ53S48 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
ALFQ53S48 AP000974.1-201ENST00000623909 2387 ntBASIC19.3■□□□□ 0.68
ALFQ53S48 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ALFQ53S48 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms