Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CHRFAM7AQ494W8 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHRFAM7AQ494W8 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHRFAM7AQ494W8 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHRFAM7AQ494W8 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CHRFAM7AQ494W8 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHRFAM7AQ494W8 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHRFAM7AQ494W8 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHRFAM7AQ494W8 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHRFAM7AQ494W8 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.47■□□□□ 0.23
CHRFAM7AQ494W8 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHRFAM7AQ494W8 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHRFAM7AQ494W8 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CHRFAM7AQ494W8 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHRFAM7AQ494W8 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHRFAM7AQ494W8 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.47■□□□□ 0.23
CHRFAM7AQ494W8 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHRFAM7AQ494W8 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.47■□□□□ 0.23
CHRFAM7AQ494W8 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
CHRFAM7AQ494W8 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHRFAM7AQ494W8 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHRFAM7AQ494W8 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CHRFAM7AQ494W8 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CHRFAM7AQ494W8 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHRFAM7AQ494W8 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
CHRFAM7AQ494W8 MIR1238-201ENST00000408483 83 ntBASIC16.47■□□□□ 0.23
CHRFAM7AQ494W8 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.47■□□□□ 0.23
CHRFAM7AQ494W8 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.47■□□□□ 0.23
CHRFAM7AQ494W8 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.47■□□□□ 0.23
CHRFAM7AQ494W8 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.47■□□□□ 0.23
CHRFAM7AQ494W8 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CHRFAM7AQ494W8 AP000525.1-201ENST00000608286 694 ntBASIC16.47■□□□□ 0.23
CHRFAM7AQ494W8 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHRFAM7AQ494W8 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.47■□□□□ 0.23
CHRFAM7AQ494W8 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC16.47■□□□□ 0.23
CHRFAM7AQ494W8 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHRFAM7AQ494W8 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHRFAM7AQ494W8 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHRFAM7AQ494W8 NBPF21P-201ENST00000425093 1451 ntBASIC16.47■□□□□ 0.23
CHRFAM7AQ494W8 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CHRFAM7AQ494W8 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHRFAM7AQ494W8 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
CHRFAM7AQ494W8 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CHRFAM7AQ494W8 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHRFAM7AQ494W8 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CHRFAM7AQ494W8 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHRFAM7AQ494W8 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHRFAM7AQ494W8 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHRFAM7AQ494W8 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHRFAM7AQ494W8 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.46■□□□□ 0.23
CHRFAM7AQ494W8 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHRFAM7AQ494W8 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHRFAM7AQ494W8 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHRFAM7AQ494W8 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHRFAM7AQ494W8 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CHRFAM7AQ494W8 AP002982.1-201ENST00000492365 877 ntBASIC16.46■□□□□ 0.23
CHRFAM7AQ494W8 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.46■□□□□ 0.23
CHRFAM7AQ494W8 NUDT16P1-203ENST00000513809 620 ntBASIC16.46■□□□□ 0.23
CHRFAM7AQ494W8 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.46■□□□□ 0.23
CHRFAM7AQ494W8 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.46■□□□□ 0.23
CHRFAM7AQ494W8 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.46■□□□□ 0.23
CHRFAM7AQ494W8 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHRFAM7AQ494W8 AC004264.1-201ENST00000608354 794 ntBASIC16.46■□□□□ 0.23
CHRFAM7AQ494W8 Six3os1_6.1-201ENST00000620790 196 ntBASIC16.46■□□□□ 0.23
CHRFAM7AQ494W8 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CHRFAM7AQ494W8 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CHRFAM7AQ494W8 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHRFAM7AQ494W8 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHRFAM7AQ494W8 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHRFAM7AQ494W8 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CHRFAM7AQ494W8 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHRFAM7AQ494W8 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHRFAM7AQ494W8 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.46■□□□□ 0.23
CHRFAM7AQ494W8 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHRFAM7AQ494W8 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHRFAM7AQ494W8 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHRFAM7AQ494W8 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC16.46■□□□□ 0.23
CHRFAM7AQ494W8 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CHRFAM7AQ494W8 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.46■□□□□ 0.22
CHRFAM7AQ494W8 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.46■□□□□ 0.22
CHRFAM7AQ494W8 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CHRFAM7AQ494W8 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.22
CHRFAM7AQ494W8 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.45■□□□□ 0.22
CHRFAM7AQ494W8 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.45■□□□□ 0.22
CHRFAM7AQ494W8 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRFAM7AQ494W8 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CHRFAM7AQ494W8 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRFAM7AQ494W8 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRFAM7AQ494W8 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.45■□□□□ 0.22
CHRFAM7AQ494W8 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CHRFAM7AQ494W8 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.45■□□□□ 0.22
CHRFAM7AQ494W8 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.45■□□□□ 0.22
CHRFAM7AQ494W8 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
CHRFAM7AQ494W8 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CHRFAM7AQ494W8 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRFAM7AQ494W8 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.45■□□□□ 0.22
CHRFAM7AQ494W8 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRFAM7AQ494W8 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRFAM7AQ494W8 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHRFAM7AQ494W8 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms