Protein–RNA interactions for Protein: Q2M389

WASHC4, WASH complex subunit 4, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WASHC4Q2M389 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
WASHC4Q2M389 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
WASHC4Q2M389 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
WASHC4Q2M389 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC23.24■■□□□ 1.31
WASHC4Q2M389 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
WASHC4Q2M389 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
WASHC4Q2M389 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
WASHC4Q2M389 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC23.24■■□□□ 1.31
WASHC4Q2M389 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC23.24■■□□□ 1.31
WASHC4Q2M389 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC23.24■■□□□ 1.31
WASHC4Q2M389 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
WASHC4Q2M389 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
WASHC4Q2M389 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC23.24■■□□□ 1.31
WASHC4Q2M389 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC23.24■■□□□ 1.31
WASHC4Q2M389 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC23.24■■□□□ 1.31
WASHC4Q2M389 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
WASHC4Q2M389 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
WASHC4Q2M389 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
WASHC4Q2M389 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
WASHC4Q2M389 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
WASHC4Q2M389 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
WASHC4Q2M389 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC23.24■■□□□ 1.31
WASHC4Q2M389 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
WASHC4Q2M389 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
WASHC4Q2M389 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
WASHC4Q2M389 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
WASHC4Q2M389 SLC25A24-204ENST00000569674 2357 ntBASIC23.23■■□□□ 1.31
WASHC4Q2M389 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
WASHC4Q2M389 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
WASHC4Q2M389 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC23.23■■□□□ 1.31
WASHC4Q2M389 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
WASHC4Q2M389 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC23.23■■□□□ 1.31
WASHC4Q2M389 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
WASHC4Q2M389 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
WASHC4Q2M389 SDHAP1-207ENST00000440850 2000 ntBASIC23.23■■□□□ 1.31
WASHC4Q2M389 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
WASHC4Q2M389 TP73-202ENST00000354437 2140 ntTSL 5 BASIC23.23■■□□□ 1.31
WASHC4Q2M389 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
WASHC4Q2M389 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
WASHC4Q2M389 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
WASHC4Q2M389 TSPY21P-201ENST00000433481 731 ntBASIC23.23■■□□□ 1.31
WASHC4Q2M389 TSPY23P-201ENST00000440136 739 ntBASIC23.23■■□□□ 1.31
WASHC4Q2M389 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC23.23■■□□□ 1.31
WASHC4Q2M389 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC23.23■■□□□ 1.31
WASHC4Q2M389 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC23.23■■□□□ 1.31
WASHC4Q2M389 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC23.23■■□□□ 1.31
WASHC4Q2M389 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC23.23■■□□□ 1.31
WASHC4Q2M389 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC23.23■■□□□ 1.31
WASHC4Q2M389 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
WASHC4Q2M389 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
WASHC4Q2M389 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
WASHC4Q2M389 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
WASHC4Q2M389 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
WASHC4Q2M389 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC23.23■■□□□ 1.31
WASHC4Q2M389 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
WASHC4Q2M389 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC23.22■■□□□ 1.31
WASHC4Q2M389 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
WASHC4Q2M389 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
WASHC4Q2M389 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
WASHC4Q2M389 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC23.22■■□□□ 1.31
WASHC4Q2M389 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
WASHC4Q2M389 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
WASHC4Q2M389 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC23.22■■□□□ 1.31
WASHC4Q2M389 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
WASHC4Q2M389 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC23.22■■□□□ 1.31
WASHC4Q2M389 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
WASHC4Q2M389 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC23.22■■□□□ 1.31
WASHC4Q2M389 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
WASHC4Q2M389 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
WASHC4Q2M389 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
WASHC4Q2M389 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
WASHC4Q2M389 GPAT2P1-201ENST00000444924 1672 ntBASIC23.22■■□□□ 1.31
WASHC4Q2M389 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
WASHC4Q2M389 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC23.22■■□□□ 1.31
WASHC4Q2M389 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC23.22■■□□□ 1.31
WASHC4Q2M389 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
WASHC4Q2M389 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC23.21■■□□□ 1.31
WASHC4Q2M389 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
WASHC4Q2M389 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC23.21■■□□□ 1.31
WASHC4Q2M389 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
WASHC4Q2M389 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC23.21■■□□□ 1.31
WASHC4Q2M389 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
WASHC4Q2M389 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
WASHC4Q2M389 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
WASHC4Q2M389 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC23.21■■□□□ 1.31
WASHC4Q2M389 MIR3652-201ENST00000579335 131 ntBASIC23.21■■□□□ 1.31
WASHC4Q2M389 AC092329.2-201ENST00000598402 547 ntBASIC23.21■■□□□ 1.31
WASHC4Q2M389 AC024243.1-201ENST00000609234 778 ntBASIC23.21■■□□□ 1.31
WASHC4Q2M389 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
WASHC4Q2M389 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC23.21■■□□□ 1.31
WASHC4Q2M389 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
WASHC4Q2M389 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
WASHC4Q2M389 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
WASHC4Q2M389 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
WASHC4Q2M389 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
WASHC4Q2M389 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
WASHC4Q2M389 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
WASHC4Q2M389 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
WASHC4Q2M389 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
WASHC4Q2M389 Z82202.1-201ENST00000623446 1880 ntBASIC23.2■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms