Protein–RNA interactions for Protein: Q0VAM2

RASGEF1B, Ras-GEF domain-containing family member 1B, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RASGEF1BQ0VAM2 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.11■□□□□ 0.33
RASGEF1BQ0VAM2 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
RASGEF1BQ0VAM2 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RASGEF1BQ0VAM2 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RASGEF1BQ0VAM2 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RASGEF1BQ0VAM2 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RASGEF1BQ0VAM2 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.1■□□□□ 0.33
RASGEF1BQ0VAM2 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RASGEF1BQ0VAM2 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RASGEF1BQ0VAM2 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.1■□□□□ 0.33
RASGEF1BQ0VAM2 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RASGEF1BQ0VAM2 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
RASGEF1BQ0VAM2 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RASGEF1BQ0VAM2 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RASGEF1BQ0VAM2 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RASGEF1BQ0VAM2 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RASGEF1BQ0VAM2 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RASGEF1BQ0VAM2 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RASGEF1BQ0VAM2 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RASGEF1BQ0VAM2 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.1■□□□□ 0.33
RASGEF1BQ0VAM2 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RASGEF1BQ0VAM2 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.1■□□□□ 0.33
RASGEF1BQ0VAM2 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RASGEF1BQ0VAM2 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
RASGEF1BQ0VAM2 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RASGEF1BQ0VAM2 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RASGEF1BQ0VAM2 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RASGEF1BQ0VAM2 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.1■□□□□ 0.33
RASGEF1BQ0VAM2 TSPY15P-201ENST00000457163 923 ntBASIC17.1■□□□□ 0.33
RASGEF1BQ0VAM2 AC008040.2-201ENST00000461049 708 ntBASIC17.1■□□□□ 0.33
RASGEF1BQ0VAM2 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.1■□□□□ 0.33
RASGEF1BQ0VAM2 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.1■□□□□ 0.33
RASGEF1BQ0VAM2 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.1■□□□□ 0.33
RASGEF1BQ0VAM2 AP000692.2-201ENST00000608391 879 ntBASIC17.1■□□□□ 0.33
RASGEF1BQ0VAM2 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RASGEF1BQ0VAM2 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RASGEF1BQ0VAM2 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RASGEF1BQ0VAM2 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RASGEF1BQ0VAM2 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
RASGEF1BQ0VAM2 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.1■□□□□ 0.33
RASGEF1BQ0VAM2 HTR7P1-202ENST00000624664 4411 ntBASIC17.1■□□□□ 0.33
RASGEF1BQ0VAM2 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
RASGEF1BQ0VAM2 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RASGEF1BQ0VAM2 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.1■□□□□ 0.33
RASGEF1BQ0VAM2 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RASGEF1BQ0VAM2 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.1■□□□□ 0.33
RASGEF1BQ0VAM2 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RASGEF1BQ0VAM2 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.1■□□□□ 0.33
RASGEF1BQ0VAM2 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
RASGEF1BQ0VAM2 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.1■□□□□ 0.33
RASGEF1BQ0VAM2 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RASGEF1BQ0VAM2 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RASGEF1BQ0VAM2 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.09■□□□□ 0.33
RASGEF1BQ0VAM2 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
RASGEF1BQ0VAM2 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.09■□□□□ 0.33
RASGEF1BQ0VAM2 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.09■□□□□ 0.33
RASGEF1BQ0VAM2 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
RASGEF1BQ0VAM2 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RASGEF1BQ0VAM2 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RASGEF1BQ0VAM2 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.09■□□□□ 0.33
RASGEF1BQ0VAM2 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.09■□□□□ 0.33
RASGEF1BQ0VAM2 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RASGEF1BQ0VAM2 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.09■□□□□ 0.33
RASGEF1BQ0VAM2 AC097488.1-201ENST00000507834 756 ntBASIC17.09■□□□□ 0.33
RASGEF1BQ0VAM2 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.09■□□□□ 0.33
RASGEF1BQ0VAM2 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RASGEF1BQ0VAM2 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.09■□□□□ 0.33
RASGEF1BQ0VAM2 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.09■□□□□ 0.33
RASGEF1BQ0VAM2 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.09■□□□□ 0.33
RASGEF1BQ0VAM2 SLC25A1P4-201ENST00000567977 778 ntBASIC17.09■□□□□ 0.33
RASGEF1BQ0VAM2 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RASGEF1BQ0VAM2 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.09■□□□□ 0.33
RASGEF1BQ0VAM2 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RASGEF1BQ0VAM2 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RASGEF1BQ0VAM2 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RASGEF1BQ0VAM2 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RASGEF1BQ0VAM2 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RASGEF1BQ0VAM2 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RASGEF1BQ0VAM2 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RASGEF1BQ0VAM2 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.09■□□□□ 0.33
RASGEF1BQ0VAM2 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RASGEF1BQ0VAM2 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.09■□□□□ 0.33
RASGEF1BQ0VAM2 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.09■□□□□ 0.33
RASGEF1BQ0VAM2 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RASGEF1BQ0VAM2 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RASGEF1BQ0VAM2 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
RASGEF1BQ0VAM2 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RASGEF1BQ0VAM2 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
RASGEF1BQ0VAM2 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RASGEF1BQ0VAM2 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RASGEF1BQ0VAM2 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
RASGEF1BQ0VAM2 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RASGEF1BQ0VAM2 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
RASGEF1BQ0VAM2 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RASGEF1BQ0VAM2 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
RASGEF1BQ0VAM2 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RASGEF1BQ0VAM2 AC141586.3-201ENST00000562166 1838 ntBASIC17.08■□□□□ 0.33
RASGEF1BQ0VAM2 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RASGEF1BQ0VAM2 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RASGEF1BQ0VAM2 AC079598.2-202ENST00000546624 1451 ntBASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms