Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD47Q08722 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CD47Q08722 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CD47Q08722 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD47Q08722 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD47Q08722 AC124283.5-201ENST00000624661 1809 ntBASIC17.49■□□□□ 0.39
CD47Q08722 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD47Q08722 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD47Q08722 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD47Q08722 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CD47Q08722 ESPNP-201ENST00000270691 2015 ntBASIC17.48■□□□□ 0.39
CD47Q08722 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.48■□□□□ 0.39
CD47Q08722 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CD47Q08722 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.48■□□□□ 0.39
CD47Q08722 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CD47Q08722 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CD47Q08722 BCL2-203ENST00000589955 5011 ntBASIC17.48■□□□□ 0.39
CD47Q08722 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CD47Q08722 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CD47Q08722 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.48■□□□□ 0.39
CD47Q08722 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CD47Q08722 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CD47Q08722 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.48■□□□□ 0.39
CD47Q08722 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.48■□□□□ 0.39
CD47Q08722 RPS2P52-201ENST00000469610 820 ntBASIC17.48■□□□□ 0.39
CD47Q08722 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.48■□□□□ 0.39
CD47Q08722 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CD47Q08722 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.48■□□□□ 0.39
CD47Q08722 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CD47Q08722 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CD47Q08722 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.48■□□□□ 0.39
CD47Q08722 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.48■□□□□ 0.39
CD47Q08722 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.48■□□□□ 0.39
CD47Q08722 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CD47Q08722 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CD47Q08722 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CD47Q08722 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CD47Q08722 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.48■□□□□ 0.39
CD47Q08722 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CD47Q08722 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.47■□□□□ 0.39
CD47Q08722 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD47Q08722 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD47Q08722 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CD47Q08722 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD47Q08722 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CD47Q08722 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CD47Q08722 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CD47Q08722 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD47Q08722 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.47■□□□□ 0.39
CD47Q08722 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CD47Q08722 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.47■□□□□ 0.39
CD47Q08722 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.47■□□□□ 0.39
CD47Q08722 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CD47Q08722 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.47■□□□□ 0.39
CD47Q08722 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.47■□□□□ 0.39
CD47Q08722 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.47■□□□□ 0.39
CD47Q08722 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CD47Q08722 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CD47Q08722 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD47Q08722 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD47Q08722 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CD47Q08722 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.47■□□□□ 0.39
CD47Q08722 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD47Q08722 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CD47Q08722 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD47Q08722 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
CD47Q08722 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.47■□□□□ 0.39
CD47Q08722 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CD47Q08722 AC073592.3-201ENST00000625118 1834 ntBASIC17.47■□□□□ 0.39
CD47Q08722 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CD47Q08722 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CD47Q08722 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CD47Q08722 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD47Q08722 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD47Q08722 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD47Q08722 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CD47Q08722 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD47Q08722 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.46■□□□□ 0.39
CD47Q08722 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD47Q08722 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.46■□□□□ 0.39
CD47Q08722 HLA-L-209ENST00000420110 1011 ntBASIC17.46■□□□□ 0.39
CD47Q08722 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.46■□□□□ 0.39
CD47Q08722 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.46■□□□□ 0.39
CD47Q08722 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.46■□□□□ 0.39
CD47Q08722 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.46■□□□□ 0.39
CD47Q08722 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.46■□□□□ 0.39
CD47Q08722 AC142086.2-201ENST00000569753 217 ntBASIC17.46■□□□□ 0.39
CD47Q08722 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.46■□□□□ 0.39
CD47Q08722 AC083906.6-201ENST00000641366 219 ntBASIC17.46■□□□□ 0.39
CD47Q08722 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD47Q08722 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.46■□□□□ 0.39
CD47Q08722 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD47Q08722 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD47Q08722 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD47Q08722 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.46■□□□□ 0.39
CD47Q08722 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD47Q08722 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CD47Q08722 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD47Q08722 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD47Q08722 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms