Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CBX1P83916 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CBX1P83916 BX664725.1-201ENST00000438252 379 ntBASIC19.73■□□□□ 0.75
CBX1P83916 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CBX1P83916 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.73■□□□□ 0.75
CBX1P83916 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CBX1P83916 RARRES2P11-201ENST00000635158 484 ntBASIC19.73■□□□□ 0.75
CBX1P83916 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CBX1P83916 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CBX1P83916 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC19.73■□□□□ 0.75
CBX1P83916 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CBX1P83916 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC19.73■□□□□ 0.75
CBX1P83916 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CBX1P83916 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CBX1P83916 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CBX1P83916 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CBX1P83916 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC19.73■□□□□ 0.75
CBX1P83916 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CBX1P83916 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CBX1P83916 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CBX1P83916 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC19.72■□□□□ 0.75
CBX1P83916 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.72■□□□□ 0.75
CBX1P83916 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC19.72■□□□□ 0.75
CBX1P83916 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CBX1P83916 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CBX1P83916 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CBX1P83916 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CBX1P83916 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CBX1P83916 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CBX1P83916 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CBX1P83916 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CBX1P83916 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CBX1P83916 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CBX1P83916 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CBX1P83916 SLC25A6P5-201ENST00000435663 894 ntBASIC19.72■□□□□ 0.75
CBX1P83916 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19.72■□□□□ 0.75
CBX1P83916 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CBX1P83916 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC19.72■□□□□ 0.75
CBX1P83916 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CBX1P83916 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CBX1P83916 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CBX1P83916 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CBX1P83916 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
CBX1P83916 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CBX1P83916 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CBX1P83916 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC19.72■□□□□ 0.75
CBX1P83916 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CBX1P83916 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CBX1P83916 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.72■□□□□ 0.75
CBX1P83916 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
CBX1P83916 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
CBX1P83916 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.71■□□□□ 0.75
CBX1P83916 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CBX1P83916 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.71■□□□□ 0.75
CBX1P83916 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CBX1P83916 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CBX1P83916 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.71■□□□□ 0.75
CBX1P83916 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CBX1P83916 AC116050.2-201ENST00000612102 1779 ntBASIC19.71■□□□□ 0.75
CBX1P83916 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CBX1P83916 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CBX1P83916 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CBX1P83916 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.71■□□□□ 0.75
CBX1P83916 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CBX1P83916 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CBX1P83916 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CBX1P83916 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CBX1P83916 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CBX1P83916 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.71■□□□□ 0.75
CBX1P83916 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CBX1P83916 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CBX1P83916 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CBX1P83916 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CBX1P83916 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CBX1P83916 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CBX1P83916 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC19.71■□□□□ 0.75
CBX1P83916 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CBX1P83916 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC19.7■□□□□ 0.74
CBX1P83916 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
CBX1P83916 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.7■□□□□ 0.74
CBX1P83916 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.7■□□□□ 0.74
CBX1P83916 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CBX1P83916 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CBX1P83916 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CBX1P83916 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.7■□□□□ 0.74
CBX1P83916 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CBX1P83916 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.7■□□□□ 0.74
CBX1P83916 AC092028.1-203ENST00000608262 953 ntBASIC19.7■□□□□ 0.74
CBX1P83916 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.7■□□□□ 0.74
CBX1P83916 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
CBX1P83916 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CBX1P83916 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CBX1P83916 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CBX1P83916 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CBX1P83916 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CBX1P83916 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CBX1P83916 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
CBX1P83916 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CBX1P83916 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CBX1P83916 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms