Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.17■□□□□ 0.021e-10■□□□□ 9.8
LSM11P83369 RAB17-202ENST00000392001 1792 ntTSL 1 (best)14.16□□□□□ -0.141e-10■□□□□ 9.8
LSM11P83369 RAB17-206ENST00000414278 1511 ntTSL 213.85□□□□□ -0.191e-10■□□□□ 9.8
LSM11P83369 RAB17-210ENST00000477149 3211 ntTSL 1 (best)12.57□□□□□ -0.41e-10■□□□□ 9.8
LSM11P83369 PCYT2-217ENST00000574343 693 ntTSL 214.38□□□□□ -0.115e-11■□□□□ 9.8
LSM11P83369 HNRNPA2B1-204ENST00000463181 6284 ntTSL 212.3□□□□□ -0.445e-11■□□□□ 9.8
LSM11P83369 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.44e-12■□□□□ 9.8
LSM11P83369 NFE2-205ENST00000553198 1208 ntTSL 513.55□□□□□ -0.244e-12■□□□□ 9.8
LSM11P83369 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.21e-6■□□□□ 9.8
LSM11P83369 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.321e-6■□□□□ 9.8
LSM11P83369 CHD4-211ENST00000544484 6554 ntTSL 2 BASIC11.4□□□□□ -0.581e-6■□□□□ 9.8
LSM11P83369 VASP-202ENST00000586014 1725 ntTSL 517.72■□□□□ 0.436e-20■□□□□ 9.8
LSM11P83369 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.056e-20■□□□□ 9.8
LSM11P83369 PLCG1-209ENST00000483175 1084 ntTSL 212.13□□□□□ -0.477e-8■□□□□ 9.8
LSM11P83369 PLCG1-221ENST00000619272 330 ntTSL 312.13□□□□□ -0.477e-8■□□□□ 9.8
LSM11P83369 PLCG1-208ENST00000477870 1051 ntTSL 211.93□□□□□ -0.57e-8■□□□□ 9.8
LSM11P83369 PLCG1-220ENST00000617873 583 ntTSL 310.67□□□□□ -0.77e-8■□□□□ 9.8
LSM11P83369 SLC5A9-202ENST00000425816 1950 ntTSL 1 (best)14.49□□□□□ -0.095e-9■□□□□ 9.8
LSM11P83369 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.375e-9■□□□□ 9.8
LSM11P83369 SLC5A9-209ENST00000532322 968 ntTSL 1 (best)12.62□□□□□ -0.395e-9■□□□□ 9.8
LSM11P83369 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC13.21□□□□□ -0.299e-12■□□□□ 9.8
LSM11P83369 SLC26A6-220ENST00000489483 5682 ntTSL 212.9□□□□□ -0.349e-12■□□□□ 9.8
LSM11P83369 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC12.74□□□□□ -0.379e-12■□□□□ 9.8
LSM11P83369 SLC26A6-201ENST00000307364 2586 ntTSL 1 (best)12.37□□□□□ -0.439e-12■□□□□ 9.8
LSM11P83369 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.459e-12■□□□□ 9.8
LSM11P83369 SLC26A6-204ENST00000383733 2545 ntTSL 1 (best) BASIC12.22□□□□□ -0.459e-12■□□□□ 9.8
LSM11P83369 SLC26A6-203ENST00000358747 2729 ntTSL 1 (best) BASIC12.08□□□□□ -0.489e-12■□□□□ 9.8
LSM11P83369 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.489e-12■□□□□ 9.8
LSM11P83369 SLC26A6-217ENST00000480524 2727 ntTSL 1 (best)11.81□□□□□ -0.529e-12■□□□□ 9.8
LSM11P83369 GAS5-209ENST00000430245 723 ntTSL 3 BASIC13.17□□□□□ -0.34e-11■□□□□ 9.8
LSM11P83369 GAS5-203ENST00000416952 799 ntTSL 212.7□□□□□ -0.384e-11■□□□□ 9.8
LSM11P83369 GAS5-229ENST00000458220 469 ntTSL 212.62□□□□□ -0.394e-11■□□□□ 9.8
LSM11P83369 GAS5-222ENST00000451607 1007 ntTSL 5 BASIC10.13□□□□□ -0.794e-11■□□□□ 9.8
LSM11P83369 GAS5-204ENST00000421068 1060 ntTSL 29.31□□□□□ -0.924e-11■□□□□ 9.8
LSM11P83369 GAS5-206ENST00000422183 745 ntTSL 29.25□□□□□ -0.934e-11■□□□□ 9.8
LSM11P83369 GAS5-201ENST00000412059 979 ntTSL 58.88□□□□□ -0.994e-11■□□□□ 9.8
LSM11P83369 GAS5-226ENST00000455838 632 ntTSL 28.88□□□□□ -0.994e-11■□□□□ 9.8
LSM11P83369 GAS5-215ENST00000442067 1114 ntTSL 28.78□□□□□ -14e-11■□□□□ 9.8
LSM11P83369 GAS5-224ENST00000454068 688 ntTSL 5 BASIC8.75□□□□□ -1.014e-11■□□□□ 9.8
LSM11P83369 GAS5-216ENST00000443799 897 ntTSL 58.28□□□□□ -1.084e-11■□□□□ 9.8
LSM11P83369 GAS5-214ENST00000436656 822 ntTSL 38.23□□□□□ -1.094e-11■□□□□ 9.8
LSM11P83369 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC8.23□□□□□ -1.094e-11■□□□□ 9.8
LSM11P83369 GAS5-228ENST00000456812 723 ntTSL 38.14□□□□□ -1.114e-11■□□□□ 9.8
LSM11P83369 GAS5-210ENST00000431268 1698 ntTSL 27.76□□□□□ -1.174e-11■□□□□ 9.8
LSM11P83369 GAS5-227ENST00000456293 583 ntTSL 37.56□□□□□ -1.24e-11■□□□□ 9.8
LSM11P83369 GAS5-223ENST00000452197 483 ntTSL 3 BASIC7.49□□□□□ -1.214e-11■□□□□ 9.8
LSM11P83369 GAS5-220ENST00000449589 712 ntTSL 37.33□□□□□ -1.244e-11■□□□□ 9.8
LSM11P83369 GAS5-218ENST00000448718 565 ntTSL 2 BASIC7.11□□□□□ -1.274e-11■□□□□ 9.8
LSM11P83369 GAS5-219ENST00000449289 542 ntTSL 3 BASIC7.1□□□□□ -1.274e-11■□□□□ 9.8
LSM11P83369 GAS5-211ENST00000432536 959 ntTSL 2 BASIC6.55□□□□□ -1.364e-11■□□□□ 9.8
LSM11P83369 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.95□□□□□ -1.464e-11■□□□□ 9.8
LSM11P83369 GAS5-205ENST00000422008 497 ntTSL 35.66□□□□□ -1.54e-11■□□□□ 9.8
LSM11P83369 GAS5-213ENST00000436285 772 ntTSL 25.57□□□□□ -1.524e-11■□□□□ 9.8
LSM11P83369 CHKB-205ENST00000468532 1052 ntTSL 527.05■■□□□ 1.923e-6■□□□□ 9.7
LSM11P83369 STARD3-229ENST00000585269 1346 ntTSL 520.09■□□□□ 0.811e-7■□□□□ 9.7
LSM11P83369 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.1■□□□□ 0.651e-7■□□□□ 9.7
LSM11P83369 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.22■□□□□ 0.511e-7■□□□□ 9.7
LSM11P83369 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.331e-7■□□□□ 9.7
LSM11P83369 STARD3-205ENST00000471896 2129 ntTSL 216.01■□□□□ 0.151e-7■□□□□ 9.7
LSM11P83369 STARD3-227ENST00000584850 2442 ntTSL 215□□□□□ -0.011e-7■□□□□ 9.7
LSM11P83369 STARD3-208ENST00000488876 2404 ntTSL 213.78□□□□□ -0.21e-7■□□□□ 9.7
LSM11P83369 STARD3-206ENST00000481171 3451 ntTSL 29.98□□□□□ -0.811e-7■□□□□ 9.7
LSM11P83369 SUPT5H-218ENST00000600818 718 ntTSL 211.86□□□□□ -0.513e-7■□□□□ 9.7
LSM11P83369 TMC6-209ENST00000588087 2384 ntTSL 220.42■□□□□ 0.861e-7■□□□□ 9.7
LSM11P83369 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.84■□□□□ 0.771e-7■□□□□ 9.7
LSM11P83369 SNHG4-202ENST00000505522 629 ntTSL 1 (best)10.62□□□□□ -0.713e-6■□□□□ 9.7
LSM11P83369 PAH-215ENST00000553106 4122 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.92e-6■□□□□ 9.7
LSM11P83369 PAH-201ENST00000307000 2466 ntTSL 5 BASIC6.9□□□□□ -1.32e-6■□□□□ 9.7
LSM11P83369 AP1G2-222ENST00000556152 673 ntTSL 39.44□□□□□ -0.98e-13■□□□□ 9.7
LSM11P83369 CWF19L1-206ENST00000478047 2694 ntTSL 29.67□□□□□ -0.866e-8■□□□□ 9.7
LSM11P83369 CWF19L1-207ENST00000482452 1606 ntTSL 59.64□□□□□ -0.876e-8■□□□□ 9.7
LSM11P83369 CWF19L1-204ENST00000468709 2402 ntTSL 29.15□□□□□ -0.946e-8■□□□□ 9.7
LSM11P83369 CWF19L1-201ENST00000354105 1815 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.116e-8■□□□□ 9.7
LSM11P83369 DDX39B-217ENST00000474961 974 ntTSL 211.18□□□□□ -0.621e-10■□□□□ 9.7
LSM11P83369 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.4■□□□□ 0.865e-6■□□□□ 9.7
LSM11P83369 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.22■□□□□ 0.675e-6■□□□□ 9.7
LSM11P83369 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.465e-6■□□□□ 9.7
LSM11P83369 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.375e-6■□□□□ 9.7
LSM11P83369 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.44■□□□□ 0.225e-6■□□□□ 9.7
LSM11P83369 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.255e-6■□□□□ 9.7
LSM11P83369 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.45e-6■□□□□ 9.7
LSM11P83369 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.237e-9■□□□□ 9.7
LSM11P83369 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.51■■□□□ 1.037e-9■□□□□ 9.7
LSM11P83369 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.01■□□□□ 0.797e-9■□□□□ 9.7
LSM11P83369 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.83■□□□□ 0.777e-9■□□□□ 9.7
LSM11P83369 PLEKHJ1-209ENST00000588545 889 ntTSL 219.64■□□□□ 0.737e-9■□□□□ 9.7
LSM11P83369 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.84■□□□□ 0.457e-9■□□□□ 9.7
LSM11P83369 PLEKHJ1-208ENST00000588450 2858 ntTSL 216.98■□□□□ 0.317e-9■□□□□ 9.7
LSM11P83369 PLEKHJ1-212ENST00000589791 1329 ntTSL 216.28■□□□□ 0.27e-9■□□□□ 9.7
LSM11P83369 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.137e-9■□□□□ 9.7
LSM11P83369 PLEKHJ1-210ENST00000588633 379 ntTSL 514.75□□□□□ -0.057e-9■□□□□ 9.7
LSM11P83369 SRSF3-201ENST00000339436 1518 ntTSL 211.39□□□□□ -0.597e-9■□□□□ 9.7
LSM11P83369 SRSF3-203ENST00000477442 1095 ntTSL 511.38□□□□□ -0.597e-9■□□□□ 9.7
LSM11P83369 SRSF3-206ENST00000620242 544 ntTSL 211.35□□□□□ -0.597e-9■□□□□ 9.7
LSM11P83369 SRSF3-204ENST00000613941 595 ntTSL 49.41□□□□□ -0.97e-9■□□□□ 9.7
LSM11P83369 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.437e-9■□□□□ 9.7
LSM11P83369 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC24.18■■□□□ 1.463e-7■□□□□ 9.7
LSM11P83369 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.313e-7■□□□□ 9.7
LSM11P83369 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.453e-7■□□□□ 9.7
LSM11P83369 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.422e-25■□□□□ 9.7
Retrieved 100 of 11,495 protein–RNA pairs in 55.4 ms