Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
HIST1H3AP68431 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
HIST1H3AP68431 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.45■□□□□ 0.22
HIST1H3AP68431 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIST1H3AP68431 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.45■□□□□ 0.22
HIST1H3AP68431 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.45■□□□□ 0.22
HIST1H3AP68431 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIST1H3AP68431 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
HIST1H3AP68431 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIST1H3AP68431 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HIST1H3AP68431 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIST1H3AP68431 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.45■□□□□ 0.22
HIST1H3AP68431 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HIST1H3AP68431 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.45■□□□□ 0.22
HIST1H3AP68431 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIST1H3AP68431 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIST1H3AP68431 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIST1H3AP68431 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.45■□□□□ 0.22
HIST1H3AP68431 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIST1H3AP68431 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.45■□□□□ 0.22
HIST1H3AP68431 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIST1H3AP68431 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIST1H3AP68431 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIST1H3AP68431 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.45■□□□□ 0.22
HIST1H3AP68431 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIST1H3AP68431 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIST1H3AP68431 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIST1H3AP68431 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
HIST1H3AP68431 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIST1H3AP68431 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIST1H3AP68431 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.45■□□□□ 0.22
HIST1H3AP68431 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.45■□□□□ 0.22
HIST1H3AP68431 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
HIST1H3AP68431 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIST1H3AP68431 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIST1H3AP68431 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
HIST1H3AP68431 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.45■□□□□ 0.22
HIST1H3AP68431 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIST1H3AP68431 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.44■□□□□ 0.22
HIST1H3AP68431 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIST1H3AP68431 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIST1H3AP68431 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HIST1H3AP68431 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HIST1H3AP68431 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HIST1H3AP68431 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.44■□□□□ 0.22
HIST1H3AP68431 AC008550.1-201ENST00000511500 884 ntBASIC16.44■□□□□ 0.22
HIST1H3AP68431 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.44■□□□□ 0.22
HIST1H3AP68431 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.44■□□□□ 0.22
HIST1H3AP68431 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.44■□□□□ 0.22
HIST1H3AP68431 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.44■□□□□ 0.22
HIST1H3AP68431 AC026471.5-201ENST00000615068 467 ntBASIC16.44■□□□□ 0.22
HIST1H3AP68431 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HIST1H3AP68431 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
HIST1H3AP68431 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HIST1H3AP68431 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
HIST1H3AP68431 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.44■□□□□ 0.22
HIST1H3AP68431 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIST1H3AP68431 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
HIST1H3AP68431 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.44■□□□□ 0.22
HIST1H3AP68431 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
HIST1H3AP68431 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIST1H3AP68431 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.43■□□□□ 0.22
HIST1H3AP68431 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIST1H3AP68431 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HIST1H3AP68431 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
HIST1H3AP68431 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HIST1H3AP68431 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIST1H3AP68431 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.43■□□□□ 0.22
HIST1H3AP68431 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
HIST1H3AP68431 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.43■□□□□ 0.22
HIST1H3AP68431 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIST1H3AP68431 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIST1H3AP68431 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HIST1H3AP68431 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
HIST1H3AP68431 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.43■□□□□ 0.22
HIST1H3AP68431 MFAP1P1-201ENST00000442257 1255 ntBASIC16.43■□□□□ 0.22
HIST1H3AP68431 AL355355.2-201ENST00000442321 338 ntBASIC16.43■□□□□ 0.22
HIST1H3AP68431 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.43■□□□□ 0.22
HIST1H3AP68431 CA15P1-201ENST00000481698 905 ntBASIC16.43■□□□□ 0.22
HIST1H3AP68431 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.43■□□□□ 0.22
HIST1H3AP68431 SLC25A1P4-201ENST00000567977 778 ntBASIC16.43■□□□□ 0.22
HIST1H3AP68431 AC008622.2-201ENST00000617006 1229 ntBASIC16.43■□□□□ 0.22
HIST1H3AP68431 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIST1H3AP68431 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.43■□□□□ 0.22
HIST1H3AP68431 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
HIST1H3AP68431 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HIST1H3AP68431 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HIST1H3AP68431 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIST1H3AP68431 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HIST1H3AP68431 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIST1H3AP68431 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
HIST1H3AP68431 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIST1H3AP68431 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.43■□□□□ 0.22
HIST1H3AP68431 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST1H3AP68431 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST1H3AP68431 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.42■□□□□ 0.22
HIST1H3AP68431 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.42■□□□□ 0.22
HIST1H3AP68431 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST1H3AP68431 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HIST1H3AP68431 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms