Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SNRPFP62306 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SNRPFP62306 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.44■□□□□ 0.86
SNRPFP62306 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
SNRPFP62306 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SNRPFP62306 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
SNRPFP62306 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SNRPFP62306 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SNRPFP62306 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
SNRPFP62306 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SNRPFP62306 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SNRPFP62306 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.44■□□□□ 0.86
SNRPFP62306 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SNRPFP62306 AP000593.1-201ENST00000393668 712 ntBASIC20.44■□□□□ 0.86
SNRPFP62306 HMGA1P5-201ENST00000412453 271 ntBASIC20.44■□□□□ 0.86
SNRPFP62306 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
SNRPFP62306 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.44■□□□□ 0.86
SNRPFP62306 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.44■□□□□ 0.86
SNRPFP62306 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.44■□□□□ 0.86
SNRPFP62306 AC145285.6-201ENST00000604632 637 ntBASIC20.44■□□□□ 0.86
SNRPFP62306 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
SNRPFP62306 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
SNRPFP62306 AC073912.3-201ENST00000624414 853 ntBASIC20.44■□□□□ 0.86
SNRPFP62306 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SNRPFP62306 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SNRPFP62306 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
SNRPFP62306 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SNRPFP62306 LINC01568-207ENST00000641790 1380 ntBASIC20.44■□□□□ 0.86
SNRPFP62306 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
SNRPFP62306 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SNRPFP62306 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNRPFP62306 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNRPFP62306 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.43■□□□□ 0.86
SNRPFP62306 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNRPFP62306 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.43■□□□□ 0.86
SNRPFP62306 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNRPFP62306 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
SNRPFP62306 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.43■□□□□ 0.86
SNRPFP62306 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SNRPFP62306 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.43■□□□□ 0.86
SNRPFP62306 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.43■□□□□ 0.86
SNRPFP62306 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.43■□□□□ 0.86
SNRPFP62306 CR769767.2-201ENST00000622735 460 ntBASIC20.43■□□□□ 0.86
SNRPFP62306 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.43■□□□□ 0.86
SNRPFP62306 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNRPFP62306 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
SNRPFP62306 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNRPFP62306 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SNRPFP62306 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNRPFP62306 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
SNRPFP62306 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNRPFP62306 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNRPFP62306 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNRPFP62306 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.42■□□□□ 0.86
SNRPFP62306 AC004408.2-201ENST00000623613 2777 ntBASIC20.42■□□□□ 0.86
SNRPFP62306 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNRPFP62306 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.42■□□□□ 0.86
SNRPFP62306 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNRPFP62306 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNRPFP62306 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNRPFP62306 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNRPFP62306 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.42■□□□□ 0.86
SNRPFP62306 FAM87A-204ENST00000613235 858 ntBASIC20.42■□□□□ 0.86
SNRPFP62306 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.42■□□□□ 0.86
SNRPFP62306 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNRPFP62306 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNRPFP62306 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNRPFP62306 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.42■□□□□ 0.86
SNRPFP62306 HOXB1-202ENST00000577092 1414 ntBASIC20.42■□□□□ 0.86
SNRPFP62306 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNRPFP62306 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNRPFP62306 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.42■□□□□ 0.86
SNRPFP62306 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.42■□□□□ 0.86
SNRPFP62306 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNRPFP62306 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNRPFP62306 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNRPFP62306 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNRPFP62306 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNRPFP62306 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNRPFP62306 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
SNRPFP62306 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNRPFP62306 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.41■□□□□ 0.86
SNRPFP62306 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
SNRPFP62306 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNRPFP62306 INGX-201ENST00000359239 846 ntBASIC20.41■□□□□ 0.86
SNRPFP62306 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.41■□□□□ 0.86
SNRPFP62306 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNRPFP62306 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.41■□□□□ 0.86
SNRPFP62306 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SNRPFP62306 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.41■□□□□ 0.86
SNRPFP62306 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.41■□□□□ 0.86
SNRPFP62306 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.41■□□□□ 0.86
SNRPFP62306 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.41■□□□□ 0.86
SNRPFP62306 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNRPFP62306 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.41■□□□□ 0.86
SNRPFP62306 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNRPFP62306 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.41■□□□□ 0.86
SNRPFP62306 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
SNRPFP62306 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
SNRPFP62306 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms